Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 8 curated entries in PaperBLAST's database that match '5.3.1.12' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS24730: uronate isomerase
is similar to:
PaperBLAST

UXAC_ECOLI / P0A8G3: Uronate isomerase; Glucuronate isomerase; Uronic isomerase; EC 5.3.1.12 from Escherichia coli
YgjZ / b3092: D-glucoronate/D-galacturonate isomerase (EC 5.3.1.12) from Escherichia coli
uxaC / P0A8G3: D-glucoronate/D-galacturonate isomerase (EC 5.3.1.12) from Escherichia coli
A0A140N3B4: glucuronate isomerase (EC 5.3.1.12) from Escherichia coli

96% id,
100% cov

UXAC_BACSU / O34808: Uronate isomerase; Glucuronate isomerase; Uronic isomerase; EC 5.3.1.12 from Bacillus subtilis

53% id,
99% cov

CA265_RS19870: Glucuronate isomerase (EC 5.3.1.12) from Pedobacter sp.

52% id,
100% cov

More...

BWI76_RS23645: uronate isomerase
is similar to:
PaperBLAST

UXAC_BACSU / O34808: Uronate isomerase; Glucuronate isomerase; Uronic isomerase; EC 5.3.1.12 from Bacillus subtilis

46% id,
99% cov

UXAC_ECOLI / P0A8G3: Uronate isomerase; Glucuronate isomerase; Uronic isomerase; EC 5.3.1.12 from Escherichia coli
YgjZ / b3092: D-glucoronate/D-galacturonate isomerase (EC 5.3.1.12) from Escherichia coli
uxaC / P0A8G3: D-glucoronate/D-galacturonate isomerase (EC 5.3.1.12) from Escherichia coli
A0A140N3B4: glucuronate isomerase (EC 5.3.1.12) from Escherichia coli

46% id,
99% cov

CA265_RS19870: Glucuronate isomerase (EC 5.3.1.12) from Pedobacter sp.

43% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory