Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 5 curated entries in PaperBLAST's database that match '5.3.3.18'.

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS13120: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase
is similar to:
PaperBLAST

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

85% id,
100% cov

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

62% id,
94% cov

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

46% id,
100% cov

BWI76_RS13115: 2,3-dehydroadipyl-CoA hydratase
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

36% id,
98% cov

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

34% id,
99% cov

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

34% id,
97% cov

BWI76_RS23945: methylmalonyl-CoA decarboxylase
is similar to:
PaperBLAST

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

29% id,
100% cov

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

30% id,
96% cov

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

28% id,
99% cov

BWI76_RS01365: multifunctional fatty acid oxidation complex subunit alpha
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

31% id,
92% cov

BWI76_RS20065: 1,4-dihydroxy-2-naphthoyl-CoA synthase
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

28% id,
98% cov

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

28% id,
95% cov

BWI76_RS20455: multifunctional fatty acid oxidation complex subunit alpha
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

27% id,
96% cov

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

28% id,
92% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory