Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 18 curated entries in PaperBLAST's database that match '5.4.2.7'.

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS04140: phosphopentomutase
is similar to:
PaperBLAST

Tlr / b4383: phosphopentomutase (EC 5.4.2.7) from Escherichia coli
deoB / RF|NP_418800: phosphopentomutase; EC 5.4.2.7 from Escherichia coli
deoB: phosphopentomutase; EC 5.4.2.7 from Escherichia coli
deoB / P0A6K6: phosphopentomutase (EC 5.4.2.7) from Escherichia coli
P0A6K6: phosphopentomutase (EC 5.4.2.7) from Escherichia coli

93% id,
100% cov

SO1219: Phosphopentomutase (EC 5.4.2.7) from Shewanella oneidensis

70% id,
100% cov

Dshi_0829: Phosphopentomutase (EC 5.4.2.7) from Dinoroseobacter shibae

47% id,
100% cov

More...

BWI76_RS25130: phosphoglucosamine mutase
is similar to:
PaperBLAST

PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis
Q6I7B6: phosphopentomutase (EC 5.4.2.7) from Thermococcus kodakarensis

32% id,
66% cov

PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe

24% id,
70% cov

PGM2_HUMAN / Q96G03: Phosphoglucomutase-2; PGM 2; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphopentomutase; EC 5.4.2.2; EC 5.4.2.7 from Homo sapiens
PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens

23% id,
74% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory