Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 61 curated entries in PaperBLAST's database that match '5.4.99.5' as complete word(s).

These curated entries have 44 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS21475: bifunctional chorismate mutase/prephenate dehydrogenase
is similar to:
PaperBLAST

TyrA / b2600: fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli
tyrA / P07023: fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli

91% id,
100% cov

BWI76_RS21465: bifunctional chorismate mutase/prephenate dehydratase
is similar to:
PaperBLAST

CMPDT_ECOLI / P0A9J8: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli
PheA / b2599: fused chorismate mutase/prephenate dehydratase (EC 5.4.99.5; EC 4.2.1.51) from Escherichia coli
CH_024084: P-protein; EC 4.2.1.51; EC 5.4.99.5 from Escherichia coli
pheA / P0A9J8: fused chorismate mutase/prephenate dehydratase (EC 5.4.99.5; EC 4.2.1.51) from Escherichia coli

89% id,
100% cov

C7EXK8: prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Escherichia coli

88% id,
100% cov

CMPDT_BUCAI / P57472: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Buchnera aphidicola

48% id,
100% cov

More...

BWI76_RS14505: salicylate synthase Irp9
is similar to:
PaperBLAST

MBTI_MYCTU / P9WFX1: Salicylate synthase; Chorismate mutase; CM; Isochorismate synthase/isochorismate lyase; Mycobactin synthase protein; EC 5.4.99.5; EC 4.2.99.21; EC 5.4.4.2 from Mycobacterium tuberculosis

37% id,
92% cov

BWI76_RS11860: anthranilate synthase component I
is similar to:
PaperBLAST

MBTI_MYCTU / P9WFX1: Salicylate synthase; Chorismate mutase; CM; Isochorismate synthase/isochorismate lyase; Mycobactin synthase protein; EC 5.4.99.5; EC 4.2.99.21; EC 5.4.4.2 from Mycobacterium tuberculosis

31% id,
68% cov

BWI76_RS17865: aminodeoxychorismate synthase subunit I
is similar to:
PaperBLAST

MBTI_MYCTU / P9WFX1: Salicylate synthase; Chorismate mutase; CM; Isochorismate synthase/isochorismate lyase; Mycobactin synthase protein; EC 5.4.99.5; EC 4.2.99.21; EC 5.4.4.2 from Mycobacterium tuberculosis

31% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory