Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 186 curated entries in PaperBLAST's database that match '6.2.1.1'.

These curated entries have 142 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS02095: acetyl-coenzyme A synthetase
is similar to:
PaperBLAST

ACSA_ECOLI / P27550: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Escherichia coli
AcsA / b4069: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.1; EC 6.2.1.17) from Escherichia coli
acs / P27550: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.17; EC 6.2.1.1) from Escherichia coli

93% id,
100% cov

ACSA_SALTY / Q8ZKF6: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Salmonella typhimurium

93% id,
100% cov

AO356_18695: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

69% id,
100% cov

More...

BWI76_RS21400: protein lysine acetyltransferase
is similar to:
PaperBLAST

C4LUV9: acetate-CoA ligase (ADP-forming) (EC 6.2.1.13) from Entamoeba histolytica

34% id,
100% cov

Q9NAT4: acetate-CoA ligase (ADP-forming) (EC 6.2.1.13) from Entamoeba histolytica

34% id,
100% cov

ACDA1_PYRFU / E7FI45: Acetate--CoA ligase [ADP-forming] I subunit alpha; ADP-forming acetyl coenzyme A synthetase I subunit alpha; ACS I subunit alpha; EC 6.2.1.13 from Pyrococcus furiosus
acdA / E7FI45: acetate-CoA ligase α subunit (EC 6.2.1.13) from Pyrococcus furiosus

33% id,
100% cov

More...

BWI76_RS17800: long-chain-fatty-acid--CoA ligase
is similar to:
PaperBLAST

4CL2_ORYSJ / Q42982: 4-coumarate--CoA ligase 2; 4CL 2; Os4CL2; 4-coumaroyl-CoA synthase 2; EC 6.2.1.12 from Oryza sativa
Q42982: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

32% id,
95% cov

D5LLN7: 4-coumarate-CoA ligase (EC 6.2.1.12) from Sorbus aucuparia

31% id,
98% cov

O24146: 4-coumarate-CoA ligase (EC 6.2.1.12) from Nicotiana tabacum

31% id,
94% cov

More...

BWI76_RS08430: succinate--CoA ligase subunit alpha
is similar to:
PaperBLAST

ccsB / Q75VW6: citryl-CoA synthetase small subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW6: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus

35% id,
84% cov

C4LUV9: acetate-CoA ligase (ADP-forming) (EC 6.2.1.13) from Entamoeba histolytica

26% id,
31% cov

Q9NAT4: acetate-CoA ligase (ADP-forming) (EC 6.2.1.13) from Entamoeba histolytica

26% id,
31% cov

BWI76_RS07750: 2,3-dihydroxybenzoate-AMP ligase
is similar to:
PaperBLAST

4CL1_ORYSJ / P17814: 4-coumarate--CoA ligase 1; 4CL 1; Os4CL1; 4-coumaroyl-CoA synthase 1; EC 6.2.1.12 from Oryza sativa
P17814: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

28% id,
95% cov

B8QN50: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pinus radiata

28% id,
96% cov

P41636: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pinus taeda

28% id,
96% cov

More...

BWI76_RS23695: putative acyl-CoA synthase
is similar to:
PaperBLAST

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

27% id,
98% cov

A0A0D4C3L0: 4-coumarate-CoA ligase (EC 6.2.1.12) from Plagiochasma appendiculatum

27% id,
92% cov

4CL2_ORYSJ / Q42982: 4-coumarate--CoA ligase 2; 4CL 2; Os4CL2; 4-coumaroyl-CoA synthase 2; EC 6.2.1.12 from Oryza sativa
Q42982: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

27% id,
92% cov

More...

BWI76_RS14550: 2,3-dihydroxybenzoate-AMP ligase
is similar to:
PaperBLAST

A0A0D4C3L0: 4-coumarate-CoA ligase (EC 6.2.1.12) from Plagiochasma appendiculatum

27% id,
96% cov

Q6PQ01: 4-coumarate-CoA ligase (EC 6.2.1.12) from Agastache rugosa

28% id,
90% cov

4CL5_ORYSJ / Q6ZAC1: 4-coumarate--CoA ligase 5; 4CL 5; Os4CL5; 4-coumaroyl-CoA synthase 5; EC 6.2.1.12 from Oryza sativa
Q6ZAC1: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

26% id,
94% cov

More...

BWI76_RS15070: non-ribosomal peptide synthetase
is similar to:
PaperBLAST

4CL1 / A0A4Y5UJ50: 4-coumarate:CoA ligase (EC 6.2.1.12; EC 6.2.1.34) from Avena sativa

25% id,
99% cov

D5LLN7: 4-coumarate-CoA ligase (EC 6.2.1.12) from Sorbus aucuparia

24% id,
97% cov

B7SBA0: 4-coumarate-CoA ligase (EC 6.2.1.12) from Physcomitrella patens

25% id,
93% cov

More...

BWI76_RS07715: non-ribosomal peptide synthetase
is similar to:
PaperBLAST

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

25% id,
99% cov

D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans

26% id,
84% cov

A0A0D4C3L0: 4-coumarate-CoA ligase (EC 6.2.1.12) from Plagiochasma appendiculatum

23% id,
94% cov

More...

BWI76_RS15080: hypothetical protein
is similar to:
PaperBLAST

4CL1 / A0A4Y5UJ50: 4-coumarate:CoA ligase (EC 6.2.1.12; EC 6.2.1.34) from Avena sativa

26% id,
92% cov

4CL3_ORYSJ / Q6ETN3: 4-coumarate--CoA ligase 3; 4CL 3; Os4CL3; 4-coumaroyl-CoA synthase 3; EC 6.2.1.12 from Oryza sativa
Q6ETN3: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

25% id,
89% cov

4CL4_ORYSJ / Q67W82: 4-coumarate--CoA ligase 4; 4CL 4; Os4CL4; 4-coumaroyl-CoA synthase 4; Protein RESISTANCE TO ALUMINUM 1; EC 6.2.1.12 from Oryza sativa
Q67W82: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

26% id,
87% cov

More...

BWI76_RS23315: acyl-[ACP]--phospholipid O-acyltransferase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

27% id,
86% cov

Q8S564: 4-coumarate-CoA ligase (EC 6.2.1.12) from Glycine max

25% id,
92% cov

4CL1_NARPS / A0A2H5AIX5: 4-coumarate-CoA ligase 1; EC 6.2.1.12 from Narcissus pseudonarcissus

24% id,
95% cov

More...

BWI76_RS14530: non-ribosomal peptide synthetase
is similar to:
PaperBLAST

4CL2_ORYSJ / Q42982: 4-coumarate--CoA ligase 2; 4CL 2; Os4CL2; 4-coumaroyl-CoA synthase 2; EC 6.2.1.12 from Oryza sativa
Q42982: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

27% id,
87% cov

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

26% id,
86% cov

4CL1_ARATH / Q42524: 4-coumarate--CoA ligase 1; 4CL 1; 4-coumarate--CoA ligase isoform 1; At4CL1; 4-coumaroyl-CoA synthase 1; EC 6.2.1.12 from Arabidopsis thaliana
4CL1 / Q42524: 4-coumarate coenzyme A ligase 1 (EC 6.2.1.34; EC 6.2.1.12) from Arabidopsis thaliana
Q42524: 4-coumarate-CoA ligase (EC 6.2.1.12) from Arabidopsis thaliana
TC 4.C.1.1.7 / Q42524: 4-Coumarate CoA synthase (ligase 2) (EC 6.2.1.12) from Arabidopsis thaliana

23% id,
92% cov

More...

BWI76_RS20055: 2-succinylbenzoate-CoA ligase
is similar to:
PaperBLAST

CCL2 / M4IRL4: isovalerate--CoA ligase (EC 6.2.1.1) from Humulus lupulus

28% id,
62% cov

Q8S5C2: 4-coumarate-CoA ligase (EC 6.2.1.12) from Glycine max

28% id,
54% cov

CNL / J9ZU73: cinnamate:CoA ligase (EC 6.2.1.12) from Hypericum calycinum

28% id,
36% cov

More...

BWI76_RS10005: CoA-binding protein
is similar to:
PaperBLAST

ACDA1_PYRFU / E7FI45: Acetate--CoA ligase [ADP-forming] I subunit alpha; ADP-forming acetyl coenzyme A synthetase I subunit alpha; ACS I subunit alpha; EC 6.2.1.13 from Pyrococcus furiosus
acdA / E7FI45: acetate-CoA ligase α subunit (EC 6.2.1.13) from Pyrococcus furiosus

26% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1784455-1785399 (frame +1) on NZ_CP020657
is similar to:
PaperBLAST

ccsB / Q75VW6: citryl-CoA synthetase small subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW6: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus
Also see hits to annotated proteins above

35% id,
86% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory