Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS08180: asparagine synthase B
is similar to:
PaperBLAST

ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli
asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli

94% id,
100% cov

Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

56% id,
99% cov

ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana

58% id,
96% cov

More...

BWI76_RS00250: asparagine synthetase A
is similar to:
PaperBLAST

A4I213: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Leishmania infantum

56% id,
98% cov

BWI76_RS00165: glutamine--fructose-6-phosphate aminotransferase
is similar to:
PaperBLAST

Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

35% id,
21% cov

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

22% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory