Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxybutanoate synthase, catalytic subunit' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS04695: acetolactate synthase 3 large subunit
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

92% id,
100% cov

BWI76_RS00960: acetolactate synthase 2 catalytic subunit
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

44% id,
98% cov

BWI76_RS27815: acetolactate synthase catalytic subunit
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

41% id,
98% cov

BWI76_RS06990: glyoxylate carboligase
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

35% id,
95% cov

BWI76_RS09555: pyruvate oxidase
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

31% id,
96% cov

BWI76_RS12900: hypothetical protein
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

30% id,
95% cov

BWI76_RS16750: acetolactate synthase
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

30% id,
92% cov

BWI76_RS03090: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

27% id,
77% cov

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

27% id,
40% cov

BWI76_RS02035: acetolactate synthase catalytic subunit
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

25% id,
59% cov

BWI76_RS20520: indolepyruvate decarboxylase
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

29% id,
29% cov

BWI76_RS20075: 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

25% id,
25% cov

BWI76_RS13005: thiamine pyrophosphate protein TPP-binding protein
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

29% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory