Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 1 curated entries in PaperBLAST's database that match 'cystathionine-gamma-lyase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS24210: cystathionine gamma-lyase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

49% id,
88% cov

BWI76_RS00785: cystathionine gamma-synthase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

43% id,
90% cov

BWI76_RS16730: cystathionine gamma-lyase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

41% id,
92% cov

BWI76_RS24285: cystathionine beta-lyase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

27% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

159777-160967 (frame +3) on NZ_CP020657
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea
Also see hits to annotated proteins above

43% id,
91% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory