Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella michiganensis M5al (Koxy)

Found 6 curated entries in PaperBLAST's database that match 'deoxy%ribonate transporter' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 30 relevant proteins in Klebsiella michiganensis M5al, or try another query

BWI76_RS23725: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis

100% id,
100% cov

PS417_07260: 2-deoxy-D-ribonate transporter 2 from Pseudomonas simiae

69% id,
96% cov

BWI76_RS23715: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

100% id,
100% cov

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

54% id,
96% cov

BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans

41% id,
96% cov

More...

BWI76_RS26320: MFS transporter
is similar to:
PaperBLAST

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

39% id,
97% cov

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

39% id,
95% cov

H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila

34% id,
92% cov

More...

BWI76_RS19985: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

37% id,
97% cov

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

39% id,
93% cov

H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila

36% id,
91% cov

More...

BWI76_RS03840: 4-hydroxyphenylacetate permease
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

36% id,
96% cov

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

35% id,
96% cov

BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans

30% id,
92% cov

More...

BWI76_RS27930: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

37% id,
94% cov

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

34% id,
94% cov

BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans

34% id,
95% cov

More...

BWI76_RS12915: 4-hydroxyphenylacetate permease
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

37% id,
93% cov

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

31% id,
98% cov

BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans

32% id,
93% cov

More...

BWI76_RS27095: MFS transporter
is similar to:
PaperBLAST

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

32% id,
95% cov

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

28% id,
96% cov

H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila

29% id,
93% cov

More...

BWI76_RS26955: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

28% id,
95% cov

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

27% id,
92% cov

BWI76_RS06145: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

28% id,
94% cov

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

26% id,
95% cov

BWI76_RS00595: MFS transporter
is similar to:
PaperBLAST

H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila

27% id,
92% cov

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

24% id,
94% cov

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

25% id,
91% cov

More...

BWI76_RS06050: MFS transporter family glucose-6-phosphate receptor UhpC
is similar to:
PaperBLAST

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

25% id,
98% cov

BWI76_RS16940: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

26% id,
90% cov

H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila

25% id,
89% cov

BWI76_RS22835: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

25% id,
96% cov

BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans

25% id,
90% cov

H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila

23% id,
96% cov

More...

BWI76_RS08895: MFS transporter
is similar to:
PaperBLAST

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

24% id,
96% cov

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

23% id,
90% cov

H281DRAFT_00642: 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila

22% id,
91% cov

More...

BWI76_RS04635: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

25% id,
93% cov

BWI76_RS18275: MFS transporter
is similar to:
PaperBLAST

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

23% id,
100% cov

BWI76_RS27790: MFS transporter family glucose-6-phosphate receptor UhpC
is similar to:
PaperBLAST

BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis

24% id,
95% cov

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

24% id,
93% cov

BWI76_RS03930: MFS transporter
is similar to:
PaperBLAST

BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans

24% id,
96% cov

BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis

22% id,
87% cov

BWI76_RS13565: MFS transporter
is similar to:
PaperBLAST

BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis

23% id,
94% cov

BWI76_RS24735: MFS transporter
is similar to:
PaperBLAST

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

23% id,
93% cov

BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans

24% id,
91% cov

BWI76_RS13035: MFS transporter
is similar to:
PaperBLAST

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

23% id,
89% cov

BWI76_RS27785: hexose phosphate transporter
is similar to:
PaperBLAST

BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis

22% id,
89% cov

BWI76_RS23740: MFS transporter
is similar to:
PaperBLAST

PS417_07260: 2-deoxy-D-ribonate transporter 2 from Pseudomonas simiae

23% id,
69% cov

BWI76_RS12440: MFS transporter
is similar to:
PaperBLAST

BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans

27% id,
43% cov

BWI76_RS27705: Bcr/CflA family drug resistance efflux transporter
is similar to:
PaperBLAST

BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis

26% id,
40% cov

BWI76_RS16895: 3-(3-hydroxy-phenyl)propionate transporter MhpT
is similar to:
PaperBLAST

BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis

29% id,
32% cov

BWI76_RS27675: EmrB/QacA family drug resistance transporter
is similar to:
PaperBLAST

BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis

22% id,
38% cov

BWI76_RS06135: MFS transporter
is similar to:
PaperBLAST

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

25% id,
31% cov

BWI76_RS10950: MFS transporter
is similar to:
PaperBLAST

PS417_07265: 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae

25% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 25 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory