Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 160 curated entries in PaperBLAST's database that match '1.1.1.1' as complete word(s).

These curated entries have 132 distinct sequences.

Running ublast with E ≤ 0.01

Found 27 relevant proteins in Shewanella oneidensis MR-1, or try another query

SOA0161: zinc-binding dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

C7R702: alcohol dehydrogenase (EC 1.1.1.1); all-trans-retinol dehydrogenase (NAD+) (EC 1.1.1.105) from Kangiella koreensis

88% id,
100% cov

FRMA_ECOLI / P25437: S-(hydroxymethyl)glutathione dehydrogenase; Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC 1.1.1.284; EC 1.1.1.1; EC 1.1.1.- from Escherichia coli
frmA / GB|BAA22412.1: S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.-; EC 1.1.1.1; EC 1.1.1.284 from Escherichia coli

71% id,
100% cov

ADHX_SPAAU / P79896: Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Sparus aurata

67% id,
99% cov

More...

SO2054: alcohol dehydrogenase class III (NCBI ptt file)
is similar to:
PaperBLAST

C7R702: alcohol dehydrogenase (EC 1.1.1.1); all-trans-retinol dehydrogenase (NAD+) (EC 1.1.1.105) from Kangiella koreensis

87% id,
100% cov

FRMA_ECOLI / P25437: S-(hydroxymethyl)glutathione dehydrogenase; Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC 1.1.1.284; EC 1.1.1.1; EC 1.1.1.- from Escherichia coli
frmA / GB|BAA22412.1: S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.-; EC 1.1.1.1; EC 1.1.1.284 from Escherichia coli

70% id,
100% cov

ADHX_SPAAU / P79896: Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Sparus aurata

67% id,
99% cov

More...

SO2136: aldehyde-alcohol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

ADHE_ECO57 / P0A9Q8: Bifunctional aldehyde-alcohol dehydrogenase AdhE; Alcohol dehydrogenase E; EC 1.2.1.10; EC 1.1.1.1 from Escherichia coli
ADHE_ECOLI / P0A9Q7: Bifunctional aldehyde-alcohol dehydrogenase AdhE; Alcohol dehydrogenase E; EC 1.2.1.10; EC 1.1.1.1 from Escherichia coli
AdhE / b1241: fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenasealdehyde/alcohol dehydrogenase AdhE (EC 1.1.1.1; EC 1.2.1.10) from Escherichia coli
adhE / MB|P0A9Q7: aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.10 from Escherichia coli
adhE / P0A9Q7: fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenasealdehyde/alcohol dehydrogenase AdhE (EC 1.1.1.1; EC 1.2.1.10) from Escherichia coli
P0A9Q7: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Escherichia coli

78% id,
98% cov

A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

62% id,
99% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum
aad / GB|AAD04638.1: aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.10 from Clostridium acetobutylicum
adhE / P33744: alcohol/aldehyde dehydrogenase (EC 1.1.1.1; EC 1.2.1.10; EC 1.2.1.57) from Clostridium acetobutylicum

58% id,
100% cov

More...

SO1490: alcohol dehydrogenase II (NCBI ptt file)
is similar to:
PaperBLAST

ADH2_ZYMMO / P0DJA2: Alcohol dehydrogenase 2; Alcohol dehydrogenase II; ADH II; EC 1.1.1.1 from Zymomonas mobilis
adhB / P0DJA2: alcohol dehydrogenase II monomer (EC 1.1.1.1) from Zymomonas mobilis
P0DJA2: alcohol dehydrogenase (EC 1.1.1.1) from Zymomonas mobilis

65% id,
99% cov

ADH4_SCHPO / Q09669: Alcohol dehydrogenase 4; Alcohol dehydrogenase IV; EC 1.1.1.1 from Schizosaccharomyces pombe
adh4 / RF|NP_592819.1: alcohol dehydrogenase Adh4; EC 1.1.1.1 from Schizosaccharomyces pombe
Q09669: alcohol dehydrogenase (EC 1.1.1.1) from Schizosaccharomyces pombe

62% id,
89% cov

ADH4_YEAST / P10127: Alcohol dehydrogenase 4; Alcohol dehydrogenase IV; ADHIV; EC 1.1.1.1 from Saccharomyces cerevisiae
ADH4 / P10127: alcohol dehydrogenase IV (EC 1.1.1.1) from Saccharomyces cerevisiae

54% id,
98% cov

More...

SOA0164: iron-containing alcohol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

ADH2_ZYMMO / P0DJA2: Alcohol dehydrogenase 2; Alcohol dehydrogenase II; ADH II; EC 1.1.1.1 from Zymomonas mobilis
adhB / P0DJA2: alcohol dehydrogenase II monomer (EC 1.1.1.1) from Zymomonas mobilis
P0DJA2: alcohol dehydrogenase (EC 1.1.1.1) from Zymomonas mobilis

52% id,
99% cov

ADH4_YEAST / P10127: Alcohol dehydrogenase 4; Alcohol dehydrogenase IV; ADHIV; EC 1.1.1.1 from Saccharomyces cerevisiae
ADH4 / P10127: alcohol dehydrogenase IV (EC 1.1.1.1) from Saccharomyces cerevisiae

48% id,
98% cov

ADH4_SCHPO / Q09669: Alcohol dehydrogenase 4; Alcohol dehydrogenase IV; EC 1.1.1.1 from Schizosaccharomyces pombe
adh4 / RF|NP_592819.1: alcohol dehydrogenase Adh4; EC 1.1.1.1 from Schizosaccharomyces pombe
Q09669: alcohol dehydrogenase (EC 1.1.1.1) from Schizosaccharomyces pombe

50% id,
89% cov

More...

SO4673: threonine 3-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q8U259: alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus

45% id,
98% cov

Q6RS93: alcohol dehydrogenase (EC 1.1.1.1) from Parageobacillus thermoglucosidasius

30% id,
99% cov

P42328: alcohol dehydrogenase (EC 1.1.1.1) from Geobacillus stearothermophilus

29% id,
99% cov

More...

SO1683: 3-oxoacyl-(acyl-carrier-protein) reductase, putative (NCBI ptt file)
is similar to:
PaperBLAST

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

32% id,
98% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

32% id,
93% cov

ADH1_EUPLT / A0A165U5V5: Short chain aldehyde dehydrogenase 1; ElADH1; Jolkinol C synthase; EC 1.1.1.1; EC 1.1.1.- from Euphorbia lathyris

31% id,
88% cov

More...

SO2813: oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

OXI1_COCH4 / N4WE73: Dehydrogenase OXI1; T-toxin biosynthesis protein OXI1; EC 1.1.1.1 from Cochliobolus heterostrophus

32% id,
98% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

31% id,
94% cov

ADH1_EUPLT / A0A165U5V5: Short chain aldehyde dehydrogenase 1; ElADH1; Jolkinol C synthase; EC 1.1.1.1; EC 1.1.1.- from Euphorbia lathyris

31% id,
91% cov

SO3263: 3-oxoacyl-(acyl-carrier-protein) reductase, putative (NCBI ptt file)
is similar to:
PaperBLAST

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

32% id,
96% cov

OXI1_COCH4 / N4WE73: Dehydrogenase OXI1; T-toxin biosynthesis protein OXI1; EC 1.1.1.1 from Cochliobolus heterostrophus

30% id,
97% cov

ADH1_EUPLT / A0A165U5V5: Short chain aldehyde dehydrogenase 1; ElADH1; Jolkinol C synthase; EC 1.1.1.1; EC 1.1.1.- from Euphorbia lathyris

28% id,
90% cov

More...

SO2776: 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file)
is similar to:
PaperBLAST

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

31% id,
98% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

32% id,
93% cov

ASQE_EMENI / Q5AR48: Short chain dehydrogenase asqE; 4'-methoxyviridicatin/aspoquinolone biosynthesis cluster protein asqE; Aspoquinolone biosynthesis protein E; EC 1.1.1.1 from Emericella nidulans

30% id,
96% cov

More...

SO4382: 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file)
is similar to:
PaperBLAST

A0A075B5H4: alcohol dehydrogenase (EC 1.1.1.1) from Sphingomonas sp.

29% id,
97% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

30% id,
91% cov

OXI1_COCH4 / N4WE73: Dehydrogenase OXI1; T-toxin biosynthesis protein OXI1; EC 1.1.1.1 from Cochliobolus heterostrophus

27% id,
88% cov

More...

SO2397: oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

ADH1_EUPLT / A0A165U5V5: Short chain aldehyde dehydrogenase 1; ElADH1; Jolkinol C synthase; EC 1.1.1.1; EC 1.1.1.- from Euphorbia lathyris

30% id,
94% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

29% id,
94% cov

SO2935: oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

A0A075B5H4: alcohol dehydrogenase (EC 1.1.1.1) from Sphingomonas sp.

28% id,
98% cov

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

25% id,
96% cov

DHS3_CAEEL / A5JYX5: Protein dhs-3; Alcohol dehydrogenase dhs-3; EC 1.1.1.1 from Caenorhabditis elegans

31% id,
55% cov

SO0438: oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

31% id,
89% cov

DHS3_CAEEL / A5JYX5: Protein dhs-3; Alcohol dehydrogenase dhs-3; EC 1.1.1.1 from Caenorhabditis elegans

32% id,
72% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

25% id,
73% cov

More...

SO0640: alcohol dehydrogenase, zinc-containing (NCBI ptt file)
is similar to:
PaperBLAST

Q9P6C8: alcohol dehydrogenase (EC 1.1.1.1) from Neurospora crassa

28% id,
98% cov

NOTN_ASPSM / E1ACQ9: Alcohol dehydrogenase notN; Notoamide biosynthesis cluster protein N; EC 1.1.1.1 from Aspergillus sp.

26% id,
99% cov

A3MVR8: alcohol dehydrogenase (EC 1.1.1.1) from Pyrobaculum calidifontis

26% id,
99% cov

More...

SO4469: alcohol dehydrogenase, iron-containing (NCBI ptt file)
is similar to:
PaperBLAST

A0A1D3TV27: alcohol dehydrogenase (EC 1.1.1.1) from Anaerobium acetethylicum

26% id,
98% cov

adh1 / GB|AAA83520.1: NADPH-dependent butanol dehydrogenase; EC 1.1.1.1 from Clostridium saccharobutylicum

25% id,
90% cov

A4IP64: alcohol dehydrogenase (EC 1.1.1.1); long-chain-alcohol dehydrogenase (EC 1.1.1.192) from Geobacillus thermodenitrificans

26% id,
88% cov

More...

SO0900: oxidoreductase, aldo/keto reductase family (NCBI ptt file)
is similar to:
PaperBLAST

Q5JI09: alcohol dehydrogenase (EC 1.1.1.1) from Thermococcus kodakarensis

30% id,
78% cov

Q8TZM9: alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus

29% id,
71% cov

SO2477: alcohol dehydrogenase, iron-containing (NCBI ptt file)
is similar to:
PaperBLAST

EUTG_ECOLI / P76553: Probable alcohol dehydrogenase EutG; Ethanolamine utilization protein EutG; EC 1.1.1.1 from Escherichia coli

26% id,
89% cov

A4IP64: alcohol dehydrogenase (EC 1.1.1.1); long-chain-alcohol dehydrogenase (EC 1.1.1.192) from Geobacillus thermodenitrificans

26% id,
71% cov

A0A1D3TV27: alcohol dehydrogenase (EC 1.1.1.1) from Anaerobium acetethylicum

25% id,
63% cov

SO0401: alcohol dehydrogenase, zinc-containing (NCBI ptt file)
is similar to:
PaperBLAST

F9VMI9: alcohol dehydrogenase (EC 1.1.1.1) from Sulfurisphaera tokodaii

23% id,
99% cov

P39462: alcohol dehydrogenase (EC 1.1.1.1) from Saccharolobus solfataricus

27% id,
79% cov

P50381: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus sp.

26% id,
79% cov

SO2452: alcohol dehydrogenase, zinc-containing (NCBI ptt file)
is similar to:
PaperBLAST

Q6RS93: alcohol dehydrogenase (EC 1.1.1.1) from Parageobacillus thermoglucosidasius

24% id,
96% cov

P42328: alcohol dehydrogenase (EC 1.1.1.1) from Geobacillus stearothermophilus

24% id,
96% cov

NOTN_ASPSM / E1ACQ9: Alcohol dehydrogenase notN; Notoamide biosynthesis cluster protein N; EC 1.1.1.1 from Aspergillus sp.

21% id,
58% cov

SO4141: oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

27% id,
83% cov

OXI1_COCH4 / N4WE73: Dehydrogenase OXI1; T-toxin biosynthesis protein OXI1; EC 1.1.1.1 from Cochliobolus heterostrophus

29% id,
73% cov

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

28% id,
74% cov

More...

SO1745: 3-beta hydroxysteroid dehydrogenase/isomerase family protein (NCBI ptt file)
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

24% id,
82% cov

SO1911: oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

OXI1_COCH4 / N4WE73: Dehydrogenase OXI1; T-toxin biosynthesis protein OXI1; EC 1.1.1.1 from Cochliobolus heterostrophus

27% id,
49% cov

SO1275: succinate-semialdehyde dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

24% id,
46% cov

SO3188: dTDP-glucose 4,6-dehydratase (NCBI ptt file)
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

28% id,
39% cov

SO3496: aldehyde dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum
aad / GB|AAD04638.1: aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.10 from Clostridium acetobutylicum
adhE / P33744: alcohol/aldehyde dehydrogenase (EC 1.1.1.1; EC 1.2.1.10; EC 1.2.1.57) from Clostridium acetobutylicum

22% id,
40% cov

A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

28% id,
18% cov

SO0768: Putative NADH-flavin reductase (NCBI ptt file)
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

39% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 24 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory