Searching in Shewanella oneidensis MR-1 (MR1)
Found 23 curated entries in PaperBLAST's database that match '1.1.1.103' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO4673: threonine 3-dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli | 88% id, 100% cov |
PGA1_c34320: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Phaeobacter inhibens | 59% id, 100% cov |
O31776: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Bacillus subtilis | 46% id, 98% cov |
| SO1490: alcohol dehydrogenase II (NCBI ptt file) is similar to: | PaperBLAST |
YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli | 68% id, 99% cov |
| SOA0164: iron-containing alcohol dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli | 54% id, 99% cov |
| SO2136: aldehyde-alcohol dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli | 36% id, 94% cov |
| SO2054: alcohol dehydrogenase class III (NCBI ptt file) is similar to: | PaperBLAST |
TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus | 30% id, 99% cov |
TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii | 30% id, 99% cov |
TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis | 28% id, 98% cov |
| SOA0161: zinc-binding dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
O31776: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Bacillus subtilis | 29% id, 94% cov |
TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli | 27% id, 97% cov |
| SO4469: alcohol dehydrogenase, iron-containing (NCBI ptt file) is similar to: | PaperBLAST |
YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli | 23% id, 90% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3327048-3328112 (frame -2) on 139 is similar to: | PaperBLAST |
E3PS87: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Acetoanaerobium sticklandii | 26% id, 75% cov |
Lawrence Berkeley National Laboratory