Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 9 curated entries in PaperBLAST's database that match '1.1.1.138' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO2776: 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file)
is similar to:
PaperBLAST

MTDH_ALTAL / P0C0Y4: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Allergen Alt a 8; EC 1.1.1.138 from Alternaria alternata
P0C0Y4: mannitol 2-dehydrogenase (NADP+) (EC 1.1.1.138) from Alternaria alternata

35% id,
94% cov

MTDH_HYPJE / Q8NK50: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; EC 1.1.1.138 from Hypocrea jecorina

32% id,
93% cov

MTDH_DAVTA / P0C0Y5: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Allergen Cla h 8; EC 1.1.1.138 from Davidiella tassiana
P0C0Y5: mannitol 2-dehydrogenase (NADP+) (EC 1.1.1.138) from Cladosporium herbarum

32% id,
93% cov

More...

SO4673: threonine 3-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q1ACW3: mannitol 2-dehydrogenase (NADP+) (EC 1.1.1.138) from Tuber borchii

31% id,
98% cov

A5VMM4: mannitol 2-dehydrogenase (NADP+) (EC 1.1.1.138) from Limosilactobacillus reuteri

30% id,
96% cov

SO2397: oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

MTDH_AGABI / O93868: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; EC 1.1.1.138 from Agaricus bisporus

30% id,
96% cov

SDR_YARLI / Q6CEE9: Probable NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Short chain dehydrogenase/reductase; YlSDR; EC 1.1.1.138 from Yarrowia lipolytica

31% id,
89% cov

MTDH_DAVTA / P0C0Y5: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Allergen Cla h 8; EC 1.1.1.138 from Davidiella tassiana
P0C0Y5: mannitol 2-dehydrogenase (NADP+) (EC 1.1.1.138) from Cladosporium herbarum

29% id,
94% cov

More...

SO4382: 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file)
is similar to:
PaperBLAST

MTDH_AGABI / O93868: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; EC 1.1.1.138 from Agaricus bisporus

29% id,
96% cov

SDR_YARLI / Q6CEE9: Probable NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Short chain dehydrogenase/reductase; YlSDR; EC 1.1.1.138 from Yarrowia lipolytica

32% id,
85% cov

SO3263: 3-oxoacyl-(acyl-carrier-protein) reductase, putative (NCBI ptt file)
is similar to:
PaperBLAST

MTDH_AGABI / O93868: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; EC 1.1.1.138 from Agaricus bisporus

29% id,
97% cov

SDR_YARLI / Q6CEE9: Probable NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Short chain dehydrogenase/reductase; YlSDR; EC 1.1.1.138 from Yarrowia lipolytica

28% id,
90% cov

SO1683: 3-oxoacyl-(acyl-carrier-protein) reductase, putative (NCBI ptt file)
is similar to:
PaperBLAST

SDR_YARLI / Q6CEE9: Probable NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Short chain dehydrogenase/reductase; YlSDR; EC 1.1.1.138 from Yarrowia lipolytica

29% id,
88% cov

MTDH_AGABI / O93868: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; EC 1.1.1.138 from Agaricus bisporus

27% id,
95% cov

SO2813: oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

MTDH_DAVTA / P0C0Y5: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Allergen Cla h 8; EC 1.1.1.138 from Davidiella tassiana
P0C0Y5: mannitol 2-dehydrogenase (NADP+) (EC 1.1.1.138) from Cladosporium herbarum

28% id,
94% cov

SDR_YARLI / Q6CEE9: Probable NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Short chain dehydrogenase/reductase; YlSDR; EC 1.1.1.138 from Yarrowia lipolytica

28% id,
88% cov

MTDH_HYPJE / Q8NK50: NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; EC 1.1.1.138 from Hypocrea jecorina

24% id,
94% cov

SO0438: oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

SDR_YARLI / Q6CEE9: Probable NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Short chain dehydrogenase/reductase; YlSDR; EC 1.1.1.138 from Yarrowia lipolytica

26% id,
69% cov

SOA0161: zinc-binding dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

A5VMM4: mannitol 2-dehydrogenase (NADP+) (EC 1.1.1.138) from Limosilactobacillus reuteri

26% id,
54% cov

SO1911: oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file)
is similar to:
PaperBLAST

SDR_YARLI / Q6CEE9: Probable NADP-dependent mannitol dehydrogenase; MtDH; Mannitol 2-dehydrogenase [NADP(+)]; Short chain dehydrogenase/reductase; YlSDR; EC 1.1.1.138 from Yarrowia lipolytica

24% id,
59% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory