Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 13 curated entries in PaperBLAST's database that match '1.1.1.283' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO4174: NAD dependent epimerase/dehydratase family protein (NCBI ptt file)
is similar to:
PaperBLAST

A0A1D8NEA1: methylglyoxal reductase (NADPH) (EC 1.1.1.283) from Yarrowia lipolytica

52% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory