Searching in Shewanella oneidensis MR-1 (MR1)
Found 9 curated entries in PaperBLAST's database that match '1.1.1.31' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella oneidensis MR-1, or try another query
SO1682: 3-hydroxyisobutyrate dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa | 60% id, 97% cov |
Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri | 54% id, 98% cov |
AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 51% id, 98% cov |
SO2771: 2-hydroxy-3-oxopropionate reductase (NCBI ptt file) is similar to: | PaperBLAST |
mmsB / Q76KL5: 3-hydroxyisobutyrate dehydrogenase subunit (EC 1.1.1.31) from Pseudomonas putida | 35% id, 99% cov |
AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 34% id, 99% cov |
PfGW456L13_5145: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 33% id, 99% cov |
SO1902: 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) is similar to: | PaperBLAST |
MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa | 25% id, 73% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory