Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.383' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO4349: ketol-acid reductoisomerase (NCBI ptt file)
is similar to:		 PaperBLAST

A0KS29: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383) from Shewanella sp.

 98% id,
100% cov

P05793: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Escherichia coli

 73% id,
100% cov

ilvC / O27491: acetohydroxy-acid isomeroreductase subunit (EC 1.1.1.383) from Methanothermobacter thermautotrophicus

 34% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory