Searching in Shewanella oneidensis MR-1 (MR1)
Found 8 curated entries in PaperBLAST's database that match '1.1.1.401' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Shewanella oneidensis MR-1, or try another query
SO2776: 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 36% id, 95% cov |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 33% id, 96% cov |
SO4382: 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 35% id, 94% cov |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 33% id, 94% cov |
SO1683: 3-oxoacyl-(acyl-carrier-protein) reductase, putative (NCBI ptt file) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 34% id, 94% cov |
SO4673: threonine 3-dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
D4GPB2: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Haloferax volcanii | 31% id, 100% cov |
E1QSX6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Vulcanisaeta distributa | 31% id, 88% cov |
KDRDH_SULTA / P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; EC 1.1.1.401 from Sulfobacillus thermosulfidooxidans | 25% id, 100% cov |
SO3263: 3-oxoacyl-(acyl-carrier-protein) reductase, putative (NCBI ptt file) is similar to: | PaperBLAST |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 29% id, 96% cov |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 28% id, 95% cov |
SO0438: oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file) is similar to: | PaperBLAST |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 27% id, 95% cov |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 27% id, 93% cov |
SO4141: oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) is similar to: | PaperBLAST |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 29% id, 87% cov |
SO1911: oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file) is similar to: | PaperBLAST |
C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp. | 30% id, 84% cov |
KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp. | 31% id, 50% cov |
SO2054: alcohol dehydrogenase class III (NCBI ptt file) is similar to: | PaperBLAST |
KDRDH_SULTA / P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; EC 1.1.1.401 from Sulfobacillus thermosulfidooxidans | 25% id, 77% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory