Searching in Shewanella oneidensis MR-1 (MR1)
Found 15 curated entries in PaperBLAST's database that match '1.1.99.39'.
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO2643: oxidoreductase, FAD-binding, putative (NCBI ptt file) is similar to: | PaperBLAST |
D2HDH_ECOLI / P77748: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Escherichia coli | 57% id, 100% cov |
D2HDH_PANAA / A0A0H3KZS3: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Pantoea ananatis | 57% id, 100% cov |
D2HDH_PSEPK / Q88EH0: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Pseudomonas putida | 47% id, 100% cov |
| SO1521: iron-sulfur cluster-binding protein (NCBI ptt file) is similar to: | PaperBLAST |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 25% id, 61% cov |
Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa | 24% id, 61% cov |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 27% id, 32% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory