Searching in Shewanella oneidensis MR-1 (MR1)
Found 17 curated entries in PaperBLAST's database that match '1.1.99.6' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO1521: iron-sulfur cluster-binding protein (NCBI ptt file) is similar to: | PaperBLAST |
Psest_3841: D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 25% id, 81% cov |
RR42_RS17315: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Cupriavidus basilensis | 21% id, 95% cov |
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix | 26% id, 60% cov |
| SO2643: oxidoreductase, FAD-binding, putative (NCBI ptt file) is similar to: | PaperBLAST |
DLD_ANAHA / D4MUV9: D-lactate dehydrogenase; EC 1.1.99.6 from Anaerostipes hadrus | 25% id, 81% cov |
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix | 29% id, 60% cov |
DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus | 29% id, 58% cov |
| SO1520: conserved hypothetical protein (NCBI ptt file) is similar to: | PaperBLAST |
SMc00926: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Sinorhizobium meliloti | 25% id, 53% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1593180-1594040 (frame -2) on 139 is similar to: | PaperBLAST |
SMc00926: D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) from Sinorhizobium meliloti | 24% id, 56% cov |
Lawrence Berkeley National Laboratory