Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 20 curated entries in PaperBLAST's database that match '1.14.16.1'.

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO1666: phenylalanine-4-hydroxylase (NCBI ptt file)
is similar to:
PaperBLAST

SO1666: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Shewanella oneidensis

100% id,
100% cov

Pf6N2E2_2630: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

63% id,
98% cov

AO356_03975: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

63% id,
98% cov

More...

SO1367: chorismate mutase/prephenate dehydratase (NCBI ptt file)
is similar to:
PaperBLAST

PH4H_DICDI / Q54XS1: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; Tryptophan 5-hydroxylase; TRH; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Dictyostelium discoideum

26% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory