Searching in Shewanella oneidensis MR-1 (MR1)
Found 21 curated entries in PaperBLAST's database that match '1.17.1.8' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO_1140: dihydrodipicolinate reductase (RefSeq) is similar to: | PaperBLAST |
DAPB_ECOLI / P04036: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Escherichia coli | 67% id, 99% cov |
Q9K1F1: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Neisseria meningitidis | 59% id, 98% cov |
Q2YJN7: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Brucella abortus | 47% id, 99% cov |
| SO1879: dihydrodipicolinate synthase (NCBI ptt file) is similar to: | PaperBLAST |
Q3M723: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Trichormus variabilis | 41% id, 96% cov |
| SO4174: NAD dependent epimerase/dehydratase family protein (NCBI ptt file) is similar to: | PaperBLAST |
Q8LB01: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Arabidopsis thaliana | 31% id, 20% cov |
F6HB41: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Vitis vinifera | 44% id, 10% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4346506-4347438 (frame -1) on 139 is similar to: | PaperBLAST |
Q8LB01: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Arabidopsis thaliana | 32% id, 21% cov |
Lawrence Berkeley National Laboratory