Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 101 curated entries in PaperBLAST's database that match '1.2.1.10'.

These curated entries have 73 distinct sequences.

Running ublast with E ≤ 0.01

Found 32 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO0426: pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

86% id,
100% cov

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens
A0A024R713: 2-oxoglutarate dehydrogenase system (subunit 3/3) (EC 1.2.1.105) from Homo sapiens

43% id,
91% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

42% id,
92% cov

More...

SO0538: glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

gap3 / A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa
A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa

79% id,
99% cov

SO2136: aldehyde-alcohol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

ADHE_ECO57 / P0A9Q8: Bifunctional aldehyde-alcohol dehydrogenase AdhE; Alcohol dehydrogenase E; EC 1.2.1.10; EC 1.1.1.1 from Escherichia coli
ADHE_ECOLI / P0A9Q7: Bifunctional aldehyde-alcohol dehydrogenase AdhE; Alcohol dehydrogenase E; EC 1.2.1.10; EC 1.1.1.1 from Escherichia coli
AdhE / b1241: fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenasealdehyde/alcohol dehydrogenase AdhE (EC 1.1.1.1; EC 1.2.1.10) from Escherichia coli
adhE / MB|P0A9Q7: aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.10 from Escherichia coli
adhE / P0A9Q7: fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenasealdehyde/alcohol dehydrogenase AdhE (EC 1.1.1.1; EC 1.2.1.10) from Escherichia coli
P0A9Q7: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Escherichia coli

78% id,
98% cov

A0A0H3W5U9: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus
A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

62% id,
99% cov

aad / GB|AAD04638.1: aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.10 from Clostridium acetobutylicum
adhE / P33744: alcohol/aldehyde dehydrogenase (EC 1.1.1.1; EC 1.2.1.10; EC 1.2.1.57) from Clostridium acetobutylicum

58% id,
100% cov

More...

SO1931: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

P0AFG6: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105); dihydrolipoyllysine-residue succinyltransferase (EC 2.3.1.61) from Escherichia coli

73% id,
100% cov

P36957: 2-oxoglutarate dehydrogenase system (subunit 2/3) (EC 1.2.1.105) from Homo sapiens

43% id,
85% cov

pdhC / P75392: pyruvate dehydrogenase (EC 1.2.1.104) from Mycoplasma pneumoniae

30% id,
99% cov

More...

SO1930: 2-oxoglutarate dehydrogenase, E1 component (NCBI ptt file)
is similar to:
PaperBLAST

P0AFG3: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105) from Escherichia coli

68% id,
100% cov

Q9ULD0: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105) from Homo sapiens

39% id,
95% cov

F4IWV2: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105); oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) from Arabidopsis thaliana

40% id,
93% cov

More...

SO0424: pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

P0AFG8: pyruvate dehydrogenase system (EC 1.2.1.104) from Escherichia coli

66% id,
100% cov

V9H1F5: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (EC 1.2.4.1) from Azotobacter vinelandii

64% id,
100% cov

Q8NNF6: pyruvate dehydrogenase system (subunit 3/3) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (EC 1.2.4.1) from Corynebacterium glutamicum

52% id,
96% cov

SO0425: pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli

57% id,
100% cov

pdhC / P75392: pyruvate dehydrogenase (EC 1.2.1.104) from Mycoplasma pneumoniae

30% id,
99% cov

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

27% id,
96% cov

More...

SO2345: glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

gap3 / A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa
A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa

43% id,
98% cov

SO2340: alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file)
is similar to:
PaperBLAST

P73405: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Synechocystis sp.

39% id,
100% cov

Q38799: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Arabidopsis thaliana

39% id,
88% cov

P52904: pyruvate dehydrogenase system (subunit 3/3) (EC 1.2.1.104) from Pisum sativum

37% id,
86% cov

More...

SO0931: D-erythrose-4-phosphate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

gap3 / A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa
A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa

39% id,
97% cov

SO2347: glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

gap3 / A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa
A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa

33% id,
99% cov

SO3088: fatty oxidation complex, alpha subunit (NCBI ptt file)
is similar to:
PaperBLAST

FHMCD_RHILO / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase; FHMPC dehydrogenase; EC 1.2.1.100 from Mesorhizobium japonicum
mlr6793 / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase monomer (EC 1.2.1.100) from Mesorhizobium japonicum
Q988C8: 4-pyridoxic acid dehydrogenase (EC 1.1.99.42); 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylic acid 5-dehydrogenase (EC 1.2.1.100) from Mesorhizobium japonicum

31% id,
97% cov

SO2341: alpha keto acid dehydrogenase complex, E2 component (NCBI ptt file)
is similar to:
PaperBLAST

pdhC / P75392: pyruvate dehydrogenase (EC 1.2.1.104) from Mycoplasma pneumoniae

29% id,
100% cov

P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli

34% id,
83% cov

P0AFG6: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105); dihydrolipoyllysine-residue succinyltransferase (EC 2.3.1.61) from Escherichia coli

27% id,
99% cov

More...

SO0275: N-acetyl-gamma-glutamyl-phosphate reductase (NCBI ptt file)
is similar to:
PaperBLAST

Q5JFW1: [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC 1.2.1.106) from Thermococcus kodakarensis

30% id,
96% cov

LYSY_THET2 / O50146: [LysW]-L-2-aminoadipate 6-phosphate reductase; EC 1.2.1.103 from Thermus thermophilus
lysY / O50146: [amino-group carrier protein]-L-2-aminoadipate 6-phosphate reductase (EC 1.2.1.103) from Thermus thermophilus
O50146: [amino group carrier protein]-6-phospho-L-2-aminoadipate reductase (EC 1.2.1.103); [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC 1.2.1.106) from Thermus thermophilus

30% id,
95% cov

lysY / Q4JAQ3: [amino-group carrier protein]-L-2-aminoadipate/[amino-group carrier protein]-L-glutamate phosphate reductase (EC 1.2.1.103; EC 1.2.1.106) from Sulfolobus acidocaldarius
Q4JAQ3: [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC 1.2.1.106) from Sulfolobus acidocaldarius

31% id,
70% cov

SO4702: glutathione reductase (NCBI ptt file)
is similar to:
PaperBLAST

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

30% id,
97% cov

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

28% id,
92% cov

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.2.1.104) from Mycoplasma pneumoniae

27% id,
96% cov

More...

SO0021: fatty oxidation complex, alpha subunit (NCBI ptt file)
is similar to:
PaperBLAST

FHMCD_RHILO / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase; FHMPC dehydrogenase; EC 1.2.1.100 from Mesorhizobium japonicum
mlr6793 / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase monomer (EC 1.2.1.100) from Mesorhizobium japonicum
Q988C8: 4-pyridoxic acid dehydrogenase (EC 1.1.99.42); 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylic acid 5-dehydrogenase (EC 1.2.1.100) from Mesorhizobium japonicum

30% id,
92% cov

SO2339: alpha keto acid dehydrogenase complex, E1 component, alpha subunit (NCBI ptt file)
is similar to:
PaperBLAST

P74490: pyruvate dehydrogenase system (subunit 2/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 2/2) (EC 1.2.4.1) from Synechocystis sp.

29% id,
95% cov

G0SHF3: pyruvate dehydrogenase system (subunit 2/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 2/2) (EC 1.2.4.1) from Chaetomium thermophilum

28% id,
83% cov

G3H5K6: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (EC 1.2.4.1) from Cricetulus griseus

31% id,
73% cov

More...

SO4347: acetolactate synthase II, large subunit (NCBI ptt file)
is similar to:
PaperBLAST

D9J047: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate decarboxylase (EC 4.1.1.1) from Zymomonas mobilis

21% id,
93% cov

SO0956: alkyl hydroperoxide reductase, F subunit (NCBI ptt file)
is similar to:
PaperBLAST

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

28% id,
66% cov

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

27% id,
67% cov

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens
A0A024R713: 2-oxoglutarate dehydrogenase system (subunit 3/3) (EC 1.2.1.105) from Homo sapiens

26% id,
29% cov

More...

SO1324: glutamate synthase, small subunit (NCBI ptt file)
is similar to:
PaperBLAST

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

25% id,
72% cov

SO1490: alcohol dehydrogenase II (NCBI ptt file)
is similar to:
PaperBLAST

A0A0H3W5K4: acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum

40% id,
44% cov

B0K4A2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacter sp.

40% id,
43% cov

A0A0H3W5U9: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus
A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

35% id,
47% cov

More...

SO1525: deoxyxylulose-5-phosphate synthase (NCBI ptt file)
is similar to:
PaperBLAST

P11177: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Homo sapiens

23% id,
74% cov

Q9D051: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104) from Mus musculus

21% id,
77% cov

SOA0164: iron-containing alcohol dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

B0K4A2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacter sp.

36% id,
46% cov

A0A0H3W5U9: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus
A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

37% id,
44% cov

A0A1D3TRQ6: acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Anaerobium acetethylicum

36% id,
44% cov

More...

SO1275: succinate-semialdehyde dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

A0A0H3W5U9: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus
A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

24% id,
46% cov

SO4469: alcohol dehydrogenase, iron-containing (NCBI ptt file)
is similar to:
PaperBLAST

A0A0H3W5K4: acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum

26% id,
37% cov

adh2 / GB|AAA81906.1: aldehyde-alcohol dehydrogenase 2; EC 1.1.1.1; EC 1.2.1.10 from Entamoeba histolytica

25% id,
34% cov

ADH2_ENTH1 / Q24803: Aldehyde-alcohol dehydrogenase 2; EC 1.1.1.1; EC 1.2.1.10 from Entamoeba histolytica

25% id,
34% cov

More...

SO3496: aldehyde dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

aad / GB|AAD04638.1: aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.10 from Clostridium acetobutylicum
adhE / P33744: alcohol/aldehyde dehydrogenase (EC 1.1.1.1; EC 1.2.1.10; EC 1.2.1.57) from Clostridium acetobutylicum

22% id,
40% cov

A0A0H3W5U9: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus
A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

28% id,
18% cov

SO3664: long-chain-fatty-acid--CoA ligase (NCBI ptt file)
is similar to:
PaperBLAST

LNAA_ASPFN / B8NTZ9: Aldehyde reductase lnaA; Lna diastereomeric piperazines biosynthesis cluster protein A; Non-canonical nonribosomal peptide synthetase lnaA; EC 1.2.1.101 from Aspergillus flavus
B8NTZ9: L-tyrosine reductase (EC 1.2.1.101) from Aspergillus flavus

25% id,
34% cov

SO1894: acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file)
is similar to:
PaperBLAST

P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli

22% id,
34% cov

SO2279: acetolactate synthase III, large subunit (NCBI ptt file)
is similar to:
PaperBLAST

D9J047: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate decarboxylase (EC 4.1.1.1) from Zymomonas mobilis

26% id,
26% cov

SO4378: FAD-binding protein (NCBI ptt file)
is similar to:
PaperBLAST

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

27% id,
20% cov

SO3262: acetolactate synthase isozyme I, large subunit (NCBI ptt file)
is similar to:
PaperBLAST

D9J047: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate decarboxylase (EC 4.1.1.1) from Zymomonas mobilis

30% id,
16% cov

SO2303: thioredoxin reductase (NCBI ptt file)
is similar to:
PaperBLAST

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.2.1.104) from Mycoplasma pneumoniae

46% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 30 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

645820-647283 (frame +1) on 139
is similar to:
PaperBLAST

EUTE_SALTY / P41793: Acetaldehyde dehydrogenase (acetylating) EutE; Ethanolamine utilization protein EutE; EC 1.2.1.10 from Salmonella typhimurium
eutE / P41793: acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Salmonella typhimurium
Also see hits to annotated proteins above

26% id,
79% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory