Curated BLAST
Searching in Shewanella oneidensis MR-1 (MR1)
Found 15 curated entries in PaperBLAST's database that match '1.2.1.16' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Shewanella oneidensis MR-1, or try another query
SO1275: succinate-semialdehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis | 100% id,
100% cov |
AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 72% id,
100% cov |
gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 72% id,
100% cov |
GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli | 71% id,
100% cov |
gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator | 64% id,
100% cov |
P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis | 54% id,
100% cov |
UGA2 / P38067: NAD(P)-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.16) from Saccharomyces cerevisiae | 51% id,
97% cov |
SSDH1_SCHPO / Q9US47: Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 56% id,
86% cov |
SSDH2_SCHPO / Q9UTM8: Putative succinate-semialdehyde dehydrogenase C139.05 [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 49% id,
95% cov |
SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans | 47% id,
98% cov |
Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii | 35% id,
100% cov |
SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli | 34% id,
98% cov |
Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica | 33% id,
98% cov |
More... |
SO4480: aldehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans | 37% id,
98% cov |
P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis | 35% id,
98% cov |
GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli | 35% id,
97% cov |
AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 35% id,
97% cov |
gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 35% id,
97% cov |
gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator | 33% id,
97% cov |
Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica | 33% id,
96% cov |
SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis | 32% id,
97% cov |
SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli | 31% id,
96% cov |
SSDH2_SCHPO / Q9UTM8: Putative succinate-semialdehyde dehydrogenase C139.05 [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 31% id,
97% cov |
UGA2 / P38067: NAD(P)-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.16) from Saccharomyces cerevisiae | 31% id,
96% cov |
SSDH1_SCHPO / Q9US47: Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 34% id,
86% cov |
Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii | 29% id,
98% cov |
More... |
SO2136: aldehyde-alcohol dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
sucD / GB|AAA92347.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Clostridium kluyveri | 37% id,
96% cov |
gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator | 23% id,
88% cov |
SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans | 23% id,
76% cov |
AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 23% id,
67% cov |
gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 23% id,
67% cov |
GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli | 23% id,
65% cov |
SSDH1_SCHPO / Q9US47: Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 23% id,
64% cov |
Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii | 22% id,
62% cov |
More... |
SO3496: aldehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator | 36% id,
97% cov |
AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 35% id,
99% cov |
GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli | 35% id,
98% cov |
P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis | 35% id,
97% cov |
SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans | 35% id,
97% cov |
gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 35% id,
96% cov |
SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis | 35% id,
97% cov |
Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii | 33% id,
98% cov |
UGA2 / P38067: NAD(P)-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.16) from Saccharomyces cerevisiae | 33% id,
95% cov |
SSDH2_SCHPO / Q9UTM8: Putative succinate-semialdehyde dehydrogenase C139.05 [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 32% id,
95% cov |
SSDH1_SCHPO / Q9US47: Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 34% id,
86% cov |
Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica | 31% id,
97% cov |
SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli | 30% id,
97% cov |
More... |
SO0619: succinylglutamic semialdehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator | 34% id,
95% cov |
GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli | 33% id,
95% cov |
P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis | 32% id,
94% cov |
gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 32% id,
95% cov |
SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis | 31% id,
95% cov |
AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 31% id,
95% cov |
Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica | 29% id,
96% cov |
SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli | 29% id,
96% cov |
SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans | 29% id,
93% cov |
UGA2 / P38067: NAD(P)-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.16) from Saccharomyces cerevisiae | 28% id,
94% cov |
SSDH2_SCHPO / Q9UTM8: Putative succinate-semialdehyde dehydrogenase C139.05 [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 28% id,
91% cov |
Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii | 27% id,
95% cov |
SSDH1_SCHPO / Q9US47: Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 29% id,
84% cov |
More... |
SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase, putative (NCBI ptt file)
is similar to: | PaperBLAST |
gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator | 32% id,
96% cov |
GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli | 30% id,
97% cov |
gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 32% id,
91% cov |
P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis | 29% id,
99% cov |
AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 31% id,
93% cov |
SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis | 29% id,
95% cov |
SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans | 29% id,
98% cov |
UGA2 / P38067: NAD(P)-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.16) from Saccharomyces cerevisiae | 27% id,
98% cov |
Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica | 27% id,
99% cov |
Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii | 28% id,
94% cov |
SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli | 28% id,
94% cov |
SSDH2_SCHPO / Q9UTM8: Putative succinate-semialdehyde dehydrogenase C139.05 [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 27% id,
96% cov |
SSDH1_SCHPO / Q9US47: Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 25% id,
92% cov |
More... |
SO1678: methylmalonate-semialdehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis | 31% id,
99% cov |
gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator | 30% id,
96% cov |
SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis | 30% id,
96% cov |
GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli | 29% id,
96% cov |
SSDH2_SCHPO / Q9UTM8: Putative succinate-semialdehyde dehydrogenase C139.05 [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 29% id,
97% cov |
AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 29% id,
96% cov |
SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans | 28% id,
98% cov |
gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 28% id,
96% cov |
UGA2 / P38067: NAD(P)-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.16) from Saccharomyces cerevisiae | 28% id,
94% cov |
Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica | 29% id,
91% cov |
Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii | 26% id,
99% cov |
SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli | 28% id,
90% cov |
SSDH1_SCHPO / Q9US47: Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 26% id,
86% cov |
More... |
SO3683: coniferyl aldehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis | 27% id,
97% cov |
gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator | 28% id,
90% cov |
SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans | 26% id,
91% cov |
SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli | 26% id,
89% cov |
GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli | 27% id,
84% cov |
gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 27% id,
84% cov |
AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens | 26% id,
84% cov |
SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis | 29% id,
77% cov |
Q976X5: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Sulfurisphaera tokodaii | 29% id,
71% cov |
UGA2 / P38067: NAD(P)-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.16) from Saccharomyces cerevisiae | 27% id,
75% cov |
SSDH2_SCHPO / Q9UTM8: Putative succinate-semialdehyde dehydrogenase C139.05 [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 29% id,
68% cov |
Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica | 27% id,
74% cov |
SSDH1_SCHPO / Q9US47: Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe | 27% id,
61% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory