Curated BLAST
Searching in Shewanella oneidensis MR-1 (MR1)
Found 15 curated entries in PaperBLAST's database that match '1.2.1.79' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Shewanella oneidensis MR-1, or try another query
SO1275: succinate-semialdehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli | 71% id,
100% cov |
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator | 63% id,
100% cov |
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis | 54% id,
100% cov |
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis | 35% id,
100% cov |
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP+) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans | 35% id,
100% cov |
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus | 34% id,
99% cov |
B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp. | 33% id,
100% cov |
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis | 36% id,
90% cov |
A0A0J9X1M8: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes | 31% id,
95% cov |
More... |
SO3496: aldehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli | 35% id,
98% cov |
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator | 36% id,
96% cov |
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis | 35% id,
97% cov |
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus | 31% id,
98% cov |
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis | 30% id,
99% cov |
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP+) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans | 30% id,
98% cov |
B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp. | 28% id,
99% cov |
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis | 31% id,
89% cov |
A0A0J9X1M8: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes | 29% id,
89% cov |
More... |
SO4480: aldehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis | 35% id,
98% cov |
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli | 35% id,
97% cov |
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator | 32% id,
97% cov |
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis | 31% id,
99% cov |
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP+) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans | 31% id,
99% cov |
B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp. | 31% id,
98% cov |
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus | 29% id,
98% cov |
A0A0J9X1M8: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes | 29% id,
94% cov |
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis | 30% id,
88% cov |
More... |
SO0619: succinylglutamic semialdehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli | 33% id,
95% cov |
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator | 33% id,
95% cov |
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis | 32% id,
94% cov |
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis | 27% id,
98% cov |
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus | 28% id,
93% cov |
B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp. | 27% id,
95% cov |
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP+) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans | 26% id,
97% cov |
A0A0J9X1M8: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes | 26% id,
81% cov |
More... |
SO1678: methylmalonate-semialdehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis | 31% id,
99% cov |
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP+) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans | 30% id,
99% cov |
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli | 29% id,
96% cov |
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator | 29% id,
96% cov |
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis | 28% id,
99% cov |
A0A0J9X1M8: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes | 30% id,
92% cov |
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus | 26% id,
98% cov |
More... |
SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase, putative (NCBI ptt file)
is similar to: | PaperBLAST |
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator | 32% id,
96% cov |
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli | 30% id,
97% cov |
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis | 29% id,
99% cov |
A0A0J9X1M8: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes | 29% id,
97% cov |
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP+) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans | 29% id,
94% cov |
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus | 28% id,
94% cov |
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis | 26% id,
99% cov |
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis | 28% id,
88% cov |
More... |
SO3683: coniferyl aldehyde dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis | 27% id,
97% cov |
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis | 28% id,
87% cov |
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli | 27% id,
84% cov |
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP+) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans | 24% id,
93% cov |
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator | 27% id,
83% cov |
B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp. | 29% id,
74% cov |
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis | 29% id,
73% cov |
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus | 29% id,
71% cov |
More... |
SO2136: aldehyde-alcohol dehydrogenase (NCBI ptt file)
is similar to: | PaperBLAST |
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli | 23% id,
65% cov |
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus | 25% id,
51% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory