Searching in Shewanella oneidensis MR-1 (MR1)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO1362: chorismate mutase/prephenate dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
TyrA / b2600: fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli | 57% id, 99% cov |
P43902: prephenate dehydrogenase (EC 1.3.1.12) from Haemophilus influenzae | 53% id, 98% cov |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 33% id, 89% cov |
| SO0425: pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (NCBI ptt file) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 57% id, 100% cov |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 52% id, 32% cov |
| SO2341: alpha keto acid dehydrogenase complex, E2 component (NCBI ptt file) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 34% id, 83% cov |
| SO1931: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase (NCBI ptt file) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 33% id, 67% cov |
| SO1367: chorismate mutase/prephenate dehydratase (NCBI ptt file) is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 29% id, 57% cov |
| SO1894: acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 22% id, 34% cov |
| SO1647: glutathione-regulated potassium-efflux system protein KefB, putative (NCBI ptt file) is similar to: | PaperBLAST |
P43902: prephenate dehydrogenase (EC 1.3.1.12) from Haemophilus influenzae | 29% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory