Searching in Shewanella oneidensis MR-1 (MR1)
Found 43 curated entries in PaperBLAST's database that match '1.3.3.6' as complete word(s).
These curated entries have 29 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO1897: isovaleryl-CoA dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
ACOX4_ARATH / Q96329: Acyl-coenzyme A oxidase 4, peroxisomal; AOX 4; G6p; Short-chain acyl-CoA oxidase; AtCX4; AtG6; SAOX; EC 1.3.3.6 from Arabidopsis thaliana | 30% id, 87% cov |
| SO1679: acyl-CoA dehydrogenase family protein (NCBI ptt file) is similar to: | PaperBLAST |
ACOX4_ARATH / Q96329: Acyl-coenzyme A oxidase 4, peroxisomal; AOX 4; G6p; Short-chain acyl-CoA oxidase; AtCX4; AtG6; SAOX; EC 1.3.3.6 from Arabidopsis thaliana | 24% id, 86% cov |
| SO2395: acyl-CoA dehydrogenase family protein (NCBI ptt file) is similar to: | PaperBLAST |
ACOX4_ARATH / Q96329: Acyl-coenzyme A oxidase 4, peroxisomal; AOX 4; G6p; Short-chain acyl-CoA oxidase; AtCX4; AtG6; SAOX; EC 1.3.3.6 from Arabidopsis thaliana | 25% id, 77% cov |
| SO2536: oxidoreductase, acyl-CoA dehydrogenase family (NCBI ptt file) is similar to: | PaperBLAST |
ACOX4_ARATH / Q96329: Acyl-coenzyme A oxidase 4, peroxisomal; AOX 4; G6p; Short-chain acyl-CoA oxidase; AtCX4; AtG6; SAOX; EC 1.3.3.6 from Arabidopsis thaliana | 22% id, 76% cov |
| SO2768: acyl-CoA dehydrogenase family protein (NCBI ptt file) is similar to: | PaperBLAST |
ACOX4_ARATH / Q96329: Acyl-coenzyme A oxidase 4, peroxisomal; AOX 4; G6p; Short-chain acyl-CoA oxidase; AtCX4; AtG6; SAOX; EC 1.3.3.6 from Arabidopsis thaliana | 25% id, 62% cov |
| SO0471: hypothetical dioxygenase (NCBI ptt file) is similar to: | PaperBLAST |
fabX / O25465: decanoate oxidase (EC 1.3.3.6; EC 5.3.3.14) from Helicobacter pylori | 28% id, 48% cov |
| SO2492: oxidoreductase, acyl-CoA dehydrogenase family (NCBI ptt file) is similar to: | PaperBLAST |
ACOX4_ARATH / Q96329: Acyl-coenzyme A oxidase 4, peroxisomal; AOX 4; G6p; Short-chain acyl-CoA oxidase; AtCX4; AtG6; SAOX; EC 1.3.3.6 from Arabidopsis thaliana | 27% id, 45% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory