Searching in Shewanella oneidensis MR-1 (MR1)
Found 3 curated entries in PaperBLAST's database that match '1.3.8.10' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO1897: isovaleryl-CoA dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
Q39QF5: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens | 39% id, 98% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 38% id, 90% cov |
| SO1679: acyl-CoA dehydrogenase family protein (NCBI ptt file) is similar to: | PaperBLAST |
Q39QF5: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens | 36% id, 99% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 38% id, 91% cov |
| SO2395: acyl-CoA dehydrogenase family protein (NCBI ptt file) is similar to: | PaperBLAST |
Q39QF5: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens | 31% id, 98% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 32% id, 78% cov |
| SO2768: acyl-CoA dehydrogenase family protein (NCBI ptt file) is similar to: | PaperBLAST |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 28% id, 82% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory