Searching in Shewanella oneidensis MR-1 (MR1)
Found 108 curated entries in PaperBLAST's database that match '1.4.1.2'.
These curated entries have 87 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO0426: pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 86% id, 100% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 43% id, 91% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 43% id, 91% cov |
| SO0780: glycine cleavage system H protein (NCBI ptt file) is similar to: | PaperBLAST |
P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli | 73% id, 100% cov |
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp. | 46% id, 94% cov |
P16048: glycine cleavage system (subunit 2/4) (EC 1.4.1.27) from Pisum sativum | 50% id, 78% cov |
| SO0781: glycine cleavage system P protein (NCBI ptt file) is similar to: | PaperBLAST |
P33195: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Escherichia coli | 69% id, 100% cov |
Q94B78: glycine cleavage system (subunit 4/5) (EC 1.4.1.27) from Arabidopsis thaliana | 55% id, 92% cov |
P23378: glycine cleavage system (subunit 4/4) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Homo sapiens | 54% id, 93% cov |
| SO0779: glycine cleavage system T protein (NCBI ptt file) is similar to: | PaperBLAST |
P27248: glycine cleavage system (subunit 3/3) (EC 1.4.1.27) from Escherichia coli | 68% id, 99% cov |
Q5NHP0: glycine cleavage system (EC 1.4.1.27) from Francisella tularensis | 51% id, 99% cov |
Q9WY54: glycine cleavage system (EC 1.4.1.27) from Thermotoga maritima | 41% id, 98% cov |
| SO2593: conserved hypothetical protein (NCBI ptt file) is similar to: | PaperBLAST |
DHE2_PSEAE / Q9HZE0: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Pseudomonas aeruginosa | 49% id, 97% cov |
DHE2_HALED / E1V4J5: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Halomonas elongata | 47% id, 99% cov |
AZOBR_RS00190: L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) from Azospirillum brasilense | 46% id, 100% cov |
| SO2638: leucine dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
DHPH_CALTT / F5L9G2: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Caldalkalibacillus thermarum | 48% id, 94% cov |
VDH_STRA4 / O69056: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces albus | 46% id, 95% cov |
VDH_STRCO / Q06539: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces coelicolor | 47% id, 93% cov |
| SO4702: glutathione reductase (NCBI ptt file) is similar to: | PaperBLAST |
P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp. | 27% id, 98% cov |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 28% id, 92% cov |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 28% id, 89% cov |
| SO1324: glutamate synthase, small subunit (NCBI ptt file) is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 25% id, 72% cov |
| SO0956: alkyl hydroperoxide reductase, F subunit (NCBI ptt file) is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 27% id, 67% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 26% id, 29% cov |
O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus | 26% id, 29% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory