Searching in Shewanella oneidensis MR-1 (MR1)
Found 43 curated entries in PaperBLAST's database that match '1.4.3.21' as complete word(s).
These curated entries have 30 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO0778: oxidoreductase, FAD-binding, UbiH/Coq6 family (NCBI ptt file) is similar to: | PaperBLAST |
AOFA_MOUSE / Q64133: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus | 26% id, 37% cov |
AOF_DANRE / Q6NSN2: Amine oxidase [flavin-containing]; Monoamine oxidase; MAO; Z-MAO; EC 1.4.3.21; EC 1.4.3.4 from Danio rerio | 24% id, 37% cov |
| SO1274: conserved hypothetical protein (NCBI ptt file) is similar to: | PaperBLAST |
AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens | 32% id, 23% cov |
AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus | 35% id, 16% cov |
AOFB_MOUSE / Q8BW75: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus | 35% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 790236-791492 (frame +3) on 139 is similar to: | PaperBLAST |
AOFA_MOUSE / Q64133: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus | 25% id, 38% cov |
Lawrence Berkeley National Laboratory