Searching in Shewanella oneidensis MR-1 (MR1)
Found 37 curated entries in PaperBLAST's database that match '1.5.1.1'.
These curated entries have 30 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO1792: methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase (NCBI ptt file) is similar to: | PaperBLAST |
MTDC_DROME / Q04448: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial; DNMDMC; EC 1.5.1.15; EC 3.5.4.9 from Drosophila melanogaster | 49% id, 96% cov |
Q46A53: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) from Methanosarcina barkeri | 43% id, 97% cov |
MTD2L_RAT / D3ZUA0: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2, mitochondrial; NADP-dependent methylenetetrahydrofolate dehydrogenase 2-like protein; MTHFD2-like; EC 1.5.1.15; EC 1.5.1.5; EC 3.5.4.9 from Rattus norvegicus | 43% id, 87% cov |
| SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase, putative (NCBI ptt file) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 47% id, 78% cov |
prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans | 31% id, 85% cov |
| SO4480: aldehyde dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans | 30% id, 81% cov |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 30% id, 32% cov |
| SO3496: aldehyde dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans | 27% id, 87% cov |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 28% id, 34% cov |
| SO1275: succinate-semialdehyde dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans | 26% id, 84% cov |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 28% id, 34% cov |
| SO1678: methylmalonate-semialdehyde dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans | 26% id, 73% cov |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 28% id, 31% cov |
| SO4054: 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) is similar to: | PaperBLAST |
Q9WU20: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Mus musculus | 33% id, 43% cov |
| SO0619: succinylglutamic semialdehyde dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 30% id, 33% cov |
| SO3763: spermine/spermidine synthase family protein (NCBI ptt file) is similar to: | PaperBLAST |
Q6RXX2: saccharopine dehydrogenase (NADP+, L-glutamate-forming) (EC 1.5.1.10) from Cryptococcus neoformans | 25% id, 37% cov |
| SO3683: coniferyl aldehyde dehydrogenase (NCBI ptt file) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 25% id, 32% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 12 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4207712-4208692 (frame -3) on 139 is similar to: | PaperBLAST |
Q9WU20: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Mus musculus | 31% id, 50% cov |
| 3651263-3652144 (frame +2) on 139 is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 25% id, 23% cov |
Lawrence Berkeley National Laboratory