Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 160 curated entries in PaperBLAST's database that match '2.3.1.8'.

These curated entries have 128 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO2916: phosphate acetyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

PTA_SALTY / Q8ZND6: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Salmonella typhimurium
Q8ZND6: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

67% id,
100% cov

PTA_ECOLI / P0A9M8: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Escherichia coli
Pta / b2297: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli
pta / P0A9M8: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli
P0A9M8: phosphate acetyltransferase (EC 2.3.1.8) from Escherichia coli

67% id,
100% cov

PTA_PSEAE / Q9I5A5: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Pseudomonas aeruginosa

56% id,
99% cov

More...

SO1625: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

33% id,
60% cov

SO3152: acetyltransferase, CysE/LacA/LpxA/NodL family (NCBI ptt file)
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

31% id,
55% cov

SO0916: transcriptional regulator, MarR family (NCBI ptt file)
is similar to:
PaperBLAST

NAT8_HUMAN / Q9UHE5: N-acetyltransferase 8; Acetyltransferase 2; ATase2; Camello-like protein 1; Cysteinyl-conjugate N-acetyltransferase; CCNAT; EC 2.3.1.-; EC 2.3.1.80 from Homo sapiens
NAT8 / Q9UHE5: N-acetyltransferase 8 (EC 2.3.1.80) from Homo sapiens
Q9UHE5: cysteine-S-conjugate N-acetyltransferase (EC 2.3.1.80) from Homo sapiens

35% id,
43% cov

NAT8_RAT / Q9QXT3: N-acetyltransferase 8; Acetyltransferase 2; ATase2; Camello-like protein 4; Cysteinyl-conjugate N-acetyltransferase; CCNAT; EC 2.3.1.-; EC 2.3.1.80 from Rattus norvegicus
Nat8 / Q9QXT3: cysteine-S-conjugate N-acetyltransferase (EC 2.3.1.80) from Rattus norvegicus

34% id,
44% cov

NAT8_MOUSE / Q9JIY7: N-acetyltransferase 8; Acetyltransferase 2; ATase2; Camello-like protein 4; Cysteinyl-conjugate N-acetyltransferase; CCNAT; EC 2.3.1.-; EC 2.3.1.80 from Mus musculus

34% id,
43% cov

SO3182: acetyltransferase, GNAT family (NCBI ptt file)
is similar to:
PaperBLAST

Q16KL9: aralkylamine N-acetyltransferase (EC 2.3.1.87) from Aedes aegypti

29% id,
50% cov

NAT8_RAT / Q9QXT3: N-acetyltransferase 8; Acetyltransferase 2; ATase2; Camello-like protein 4; Cysteinyl-conjugate N-acetyltransferase; CCNAT; EC 2.3.1.-; EC 2.3.1.80 from Rattus norvegicus
Nat8 / Q9QXT3: cysteine-S-conjugate N-acetyltransferase (EC 2.3.1.80) from Rattus norvegicus

31% id,
28% cov

NAT8_MOUSE / Q9JIY7: N-acetyltransferase 8; Acetyltransferase 2; ATase2; Camello-like protein 4; Cysteinyl-conjugate N-acetyltransferase; CCNAT; EC 2.3.1.-; EC 2.3.1.80 from Mus musculus

31% id,
26% cov

SO1639: UDP-3-O-(3-hydroxymyristoyl) glucosamine n-acyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

31% id,
48% cov

SO4299: chloramphenicol acetyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

58% id,
22% cov

SO3324: acetyltransferase, GNAT family (NCBI ptt file)
is similar to:
PaperBLAST

AAC6_ACIG1 / Q44245: Aminoglycoside N(6')-acetyltransferase type 1; AAC(6')-Ij; Aminoglycoside resistance protein; EC 2.3.1.82 from Acinetobacter genomosp.

27% id,
42% cov

AAC6_CITKO / P10051: Aminoglycoside N(6')-acetyltransferase type 1; AAC(6')-I; Aminoglycoside resistance protein; EC 2.3.1.82 from Citrobacter koseri
P10051: aminoglycoside 6'-N-acetyltransferase (EC 2.3.1.82) from Citrobacter koseri

27% id,
39% cov

SO1883: acetyltransferase, GNAT family (NCBI ptt file)
is similar to:
PaperBLAST

NAT8_RAT / Q9QXT3: N-acetyltransferase 8; Acetyltransferase 2; ATase2; Camello-like protein 4; Cysteinyl-conjugate N-acetyltransferase; CCNAT; EC 2.3.1.-; EC 2.3.1.80 from Rattus norvegicus
Nat8 / Q9QXT3: cysteine-S-conjugate N-acetyltransferase (EC 2.3.1.80) from Rattus norvegicus

23% id,
48% cov

SOA0060: acetyltransferase, GNAT family (NCBI ptt file)
is similar to:
PaperBLAST

SNAT2_ORYSJ / Q6Z1Y6: Serotonin N-acetyltransferase 2, chloroplastic; OsSNAT2; EC 2.3.1.87 from Oryza sativa

34% id,
29% cov

SO1602: multi-domain beta-ketoacyl synthase (NCBI ptt file)
is similar to:
PaperBLAST

FAS_HUMAN / P49327: Fatty acid synthase; Type I fatty acid synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Homo sapiens
FASN / P49327: fatty acid synthase monomer (EC 2.3.1.85; EC 2.3.1.86; EC 3.1.2.14) from Homo sapiens
P49327: fatty-acid synthase (EC 2.3.1.85) from Homo sapiens

24% id,
33% cov

FAS_MOUSE / P19096: Fatty acid synthase; Type I Fatty Acid Synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Mus musculus

28% id,
22% cov

FAS_RAT / P12785: Fatty acid synthase; Type I FAS; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Rattus norvegicus

27% id,
22% cov

More...

SO1599: multi-domain beta-ketoacyl synthase (NCBI ptt file)
is similar to:
PaperBLAST

FAS_MOUSE / P19096: Fatty acid synthase; Type I Fatty Acid Synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Mus musculus

25% id,
20% cov

FAS_RAT / P12785: Fatty acid synthase; Type I FAS; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Rattus norvegicus

24% id,
20% cov

FAS_CHICK / P12276: Fatty acid synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Gallus gallus

27% id,
17% cov

More...

SO4383: 3-oxoacyl-(acyl-carrier-protein) synthase II (NCBI ptt file)
is similar to:
PaperBLAST

FAS_MOUSE / P19096: Fatty acid synthase; Type I Fatty Acid Synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Mus musculus

29% id,
13% cov

FAS_RAT / P12785: Fatty acid synthase; Type I FAS; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Rattus norvegicus

29% id,
13% cov

FAS_BOVIN / Q71SP7: Fatty acid synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Bos taurus

30% id,
13% cov

SO4380: 3-oxoacyl-(acyl-carrier-protein) synthase II, putative (NCBI ptt file)
is similar to:
PaperBLAST

FAS_CHICK / P12276: Fatty acid synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Gallus gallus

28% id,
12% cov

FAS_BOVIN / Q71SP7: Fatty acid synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Bos taurus

28% id,
10% cov

FAS_HUMAN / P49327: Fatty acid synthase; Type I fatty acid synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Homo sapiens
FASN / P49327: fatty acid synthase monomer (EC 2.3.1.85; EC 2.3.1.86; EC 3.1.2.14) from Homo sapiens
P49327: fatty-acid synthase (EC 2.3.1.85) from Homo sapiens

28% id,
10% cov

More...

SO0640: alcohol dehydrogenase, zinc-containing (NCBI ptt file)
is similar to:
PaperBLAST

FAS_HUMAN / P49327: Fatty acid synthase; Type I fatty acid synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Homo sapiens
FASN / P49327: fatty acid synthase monomer (EC 2.3.1.85; EC 2.3.1.86; EC 3.1.2.14) from Homo sapiens
P49327: fatty-acid synthase (EC 2.3.1.85) from Homo sapiens

28% id,
12% cov

FAS_MOUSE / P19096: Fatty acid synthase; Type I Fatty Acid Synthase; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Mus musculus

27% id,
12% cov

FAS_RAT / P12785: Fatty acid synthase; Type I FAS; EC 2.3.1.85; EC 2.3.1.38; EC 2.3.1.39; EC 2.3.1.41; EC 1.1.1.100; EC 4.2.1.59; EC 1.3.1.39; EC 3.1.2.14 from Rattus norvegicus

27% id,
12% cov

More...

SO0425: pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

FAS2_YEAST / P19097: Fatty acid synthase subunit alpha; EC 2.3.1.86; EC 1.1.1.100; EC 2.3.1.41 from Saccharomyces cerevisiae
FAS2 / P19097: fatty acid synthase, α subunit (EC 2.3.1.85; EC 2.3.1.86) from Saccharomyces cerevisiae

60% id,
2% cov

FAS2_YEAST / P19097: Fatty acid synthase subunit alpha; EC 2.3.1.86; EC 1.1.1.100; EC 2.3.1.41 from Saccharomyces cerevisiae
FAS2 / P19097: fatty acid synthase, α subunit (EC 2.3.1.85; EC 2.3.1.86) from Saccharomyces cerevisiae

45% id,
3% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory