Searching in Shewanella oneidensis MR-1 (MR1)
Found 35 curated entries in PaperBLAST's database that match '2.3.3.9' as complete word(s).
These curated entries have 22 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella oneidensis MR-1, or try another query
SO1483: malate synthase A (NCBI ptt file) is similar to: | PaperBLAST |
SO1483: Malate synthase (EC 2.3.3.9) from Shewanella oneidensis | 100% id, 100% cov |
Mas / b4014: malate synthase A (EC 2.3.3.9) from Escherichia coli | 68% id, 100% cov |
BPHYT_RS12305: Malate synthase (EC 2.3.3.9) from Burkholderia phytofirmans | 50% id, 96% cov |
SO1484: isocitrate lyase (NCBI ptt file) is similar to: | PaperBLAST |
GCP_CAEEL / Q10663: Bifunctional glyoxylate cycle protein; Gex-3-interacting protein 7; EC 4.1.3.1; EC 2.3.3.9 from Caenorhabditis elegans | 58% id, 43% cov |
SO4706: malate synthase domain protein (NCBI ptt file) is similar to: | PaperBLAST |
MASZ_ECOLI / P37330: Malate synthase G; MSG; EC 2.3.3.9 from Escherichia coli | 29% id, 26% cov |
Psest_0354: Malate synthase G (EC 2.3.3.9) from Pseudomonas stutzeri | 26% id, 23% cov |
MASZ_CORGL / P42450: Malate synthase G; EC 2.3.3.9 from Corynebacterium glutamicum | 30% id, 15% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory