Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO1499: glycogen synthase (NCBI ptt file)
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

32% id,
12% cov

AAK65960.1: sucrose synthase (SS1;SBSS1) (EC 2.4.1.13)

27% id,
13% cov

SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus
AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13)
I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus

27% id,
12% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory