Searching in Shewanella oneidensis MR-1 (MR1)
Found 120 curated entries in PaperBLAST's database that match '2.4.2.2'.
These curated entries have 82 distinct sequences.
Running ublast with E ≤ 0.01
Found 12 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO3113: queuine tRNA-ribosyltransferase (NCBI ptt file) is similar to: | PaperBLAST |
TGT_ECOLI / P0A847: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Escherichia coli | 84% id, 100% cov |
Q54177: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Shigella flexneri | 84% id, 100% cov |
tgt / Q183P1: preQ1 tRNA-ribosyltransferase (EC 2.4.2.29) from Clostridioides difficile | 56% id, 99% cov |
| SO4133: uridine phosphorylase (NCBI ptt file) is similar to: | PaperBLAST |
Udp / b3831: uridine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli | 76% id, 99% cov |
TK1479 / Q5JJC1: uridine phosphorylase (EC 2.4.2.2) from Thermococcus kodakarensis | 44% id, 83% cov |
Q5XA29: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Streptococcus pyogenes | 37% id, 93% cov |
| SO1218: thymidine phosphorylase (NCBI ptt file) is similar to: | PaperBLAST |
Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli | 67% id, 100% cov |
A0A0E2M090: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Lacticaseibacillus paracasei | 43% id, 99% cov |
PDP_BACSU / P39142: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Bacillus subtilis | 43% id, 97% cov |
| SO3578: conserved hypothetical protein TIGR00726 (NCBI ptt file) is similar to: | PaperBLAST |
PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli | 55% id, 98% cov |
PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus | 35% id, 89% cov |
PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic | 31% id, 88% cov |
| SO4467: conserved hypothetical protein (NCBI ptt file) is similar to: | PaperBLAST |
PPNP_ECOLI / P0C037: Pyrimidine/purine nucleoside phosphorylase; Adenosine phosphorylase; Cytidine phosphorylase; Guanosine phosphorylase; Inosine phosphorylase; Thymidine phosphorylase; Uridine phosphorylase; Xanthosine phosphorylase; EC 2.4.2.1; EC 2.4.2.2 from Escherichia coli | 40% id, 98% cov |
| SO1035: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NCBI ptt file) is similar to: | PaperBLAST |
cobT / A0A1D9FP51: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Clostridium formicaceticum | 40% id, 96% cov |
cobT / A0A0K1TPX5: nicotinate-nucleotide--5-methoxybenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Moorella thermoacetica | 40% id, 94% cov |
cobT / P29935: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase subunit (EC 2.4.2.21) from Sinorhizobium sp. | 43% id, 88% cov |
| SO0092: purine nucleoside phosphorylase (NCBI ptt file) is similar to: | PaperBLAST |
PNPH_SACS2 / P50389: Purine nucleoside phosphorylase; PNP; 5'-methylthioadenosine phosphorylase I; MTA phosphorylase I; MTAPI; EC 2.4.2.1; EC 2.4.2.28 from Saccharolobus solfataricus | 33% id, 99% cov |
TK1479 / Q5JJC1: uridine phosphorylase (EC 2.4.2.2) from Thermococcus kodakarensis | 34% id, 86% cov |
| SO3803: hypoxanthine phosphoribosyltransferase (NCBI ptt file) is similar to: | PaperBLAST |
HGXR_TRIFO / P51900: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Tritrichomonas foetus | 34% id, 92% cov |
HGXR_PLAFG / P20035: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Plasmodium falciparum | 33% id, 78% cov |
Q8IJS1: xanthine phosphoribosyltransferase (EC 2.4.2.22); hypoxanthine phosphoribosyltransferase (EC 2.4.2.8) from Plasmodium falciparum | 33% id, 78% cov |
| SO4297: uridine phosphorylase, putative (NCBI ptt file) is similar to: | PaperBLAST |
Udp / b3831: uridine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli | 34% id, 92% cov |
TK1479 / Q5JJC1: uridine phosphorylase (EC 2.4.2.2) from Thermococcus kodakarensis | 34% id, 86% cov |
Q5XA29: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Streptococcus pyogenes | 31% id, 93% cov |
| SO1221: purine nucleoside phosphorylase (NCBI ptt file) is similar to: | PaperBLAST |
Udp / b3831: uridine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli | 30% id, 94% cov |
| SO1322: 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase (NCBI ptt file) is similar to: | PaperBLAST |
Q7XA67: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28); adenosylhomocysteine nucleosidase (EC 3.2.2.9) from Arabidopsis thaliana | 29% id, 61% cov |
| SO3021: anthranilate phosphoribosyltransferase (NCBI ptt file) is similar to: | PaperBLAST |
TYMP / P19971: thymidine phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Homo sapiens | 26% id, 31% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 12 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3958018-3958602 (frame -1) on 139 is similar to: | PaperBLAST |
HGXR_TRIFO / P51900: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Tritrichomonas foetus | 34% id, 96% cov |
| 3132045-3133238 (frame +3) on 139 is similar to: | PaperBLAST |
TYMP / P19971: thymidine phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Homo sapiens | 25% id, 38% cov |
Lawrence Berkeley National Laboratory