Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 39 curated entries in PaperBLAST's database that match '2.6.1.6'.

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO2741: adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

BIOA_PSEVU / P53656: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Pseudescherichia vulneris

59% id,
99% cov

BIOA_ECOLI / P12995: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Escherichia coli
BioA / b0774: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) from Escherichia coli
bioA / P12995: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) from Escherichia coli
P12995: adenosylmethionine-8-amino-7-oxononanoate transaminase (EC 2.6.1.62) from Escherichia coli

58% id,
98% cov

BIOA_SERMA / P36568: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Serratia marcescens

57% id,
98% cov

More...

SO2350: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli
tyrB / P04693: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.1) from Escherichia coli

46% id,
100% cov

SO0340: branched-chain amino acid aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

ilvK / P39576: branched-chain amino acid aminotransferase (EC 2.6.1.42; EC 2.6.1.6) from Bacillus subtilis

44% id,
95% cov

ilvE / O31461: branched-chain amino acid aminotransferase (EC 2.6.1.6; EC 2.6.1.42) from Bacillus subtilis

42% id,
96% cov

SO2406: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli
tyrB / P04693: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.1) from Escherichia coli

40% id,
100% cov

SO4343: aminotransferase, class V (NCBI ptt file)
is similar to:
PaperBLAST

HKT_ANOGA / Q7PRG3: 3-hydroxykynurenine transaminase; AgHKT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Anopheles gambiae

37% id,
96% cov

HKT_AEDAE / Q0IG34: 3-hydroxykynurenine transaminase; 3-hydroxykynurenine transaminase and alanine--glyoxylate aminotransferase; Ae-HKT/AGT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Aedes aegypti

36% id,
95% cov

SO3497: aminotransferase, class III (NCBI ptt file)
is similar to:
PaperBLAST

BIOA_SYNE7 / Q31SA6: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Synechococcus elongatus

30% id,
100% cov

BIOA_ECOLI / P12995: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Escherichia coli
BioA / b0774: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) from Escherichia coli
bioA / P12995: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) from Escherichia coli
P12995: adenosylmethionine-8-amino-7-oxononanoate transaminase (EC 2.6.1.62) from Escherichia coli

31% id,
96% cov

BIOA_SERMA / P36568: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Serratia marcescens

29% id,
100% cov

More...

SO0617: acetylornithine aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

BIOA_ECOLI / P12995: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Escherichia coli
BioA / b0774: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) from Escherichia coli
bioA / P12995: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) from Escherichia coli
P12995: adenosylmethionine-8-amino-7-oxononanoate transaminase (EC 2.6.1.62) from Escherichia coli

31% id,
93% cov

BIOA_PSEVU / P53656: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Pseudescherichia vulneris

35% id,
72% cov

BIOA_CORGL / P46395: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Corynebacterium glutamicum

32% id,
79% cov

More...

SO1276: 4-aminobutyrate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

BIOA_PSEVU / P53656: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Pseudescherichia vulneris

32% id,
90% cov

BIOA_CORGL / P46395: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Corynebacterium glutamicum

28% id,
96% cov

BIOA_ECOLI / P12995: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Escherichia coli
BioA / b0774: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) from Escherichia coli
bioA / P12995: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) from Escherichia coli
P12995: adenosylmethionine-8-amino-7-oxononanoate transaminase (EC 2.6.1.62) from Escherichia coli

33% id,
80% cov

More...

SO2615: 4-amino-4-deoxychorismate lyase (NCBI ptt file)
is similar to:
PaperBLAST

ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus

30% id,
89% cov

SO2282: transcriptional regulator, GntR family (NCBI ptt file)
is similar to:
PaperBLAST

AADAT_HUMAN / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Homo sapiens

28% id,
80% cov

SO1300: glutamate-1-semialdehyde-2,1-aminomutase (NCBI ptt file)
is similar to:
PaperBLAST

BIOA_SERMA / P36568: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Serratia marcescens

28% id,
75% cov

SO2483: aspartate aminotransferase, putative (NCBI ptt file)
is similar to:
PaperBLAST

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus

26% id,
72% cov

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

27% id,
62% cov

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

30% id,
41% cov

SO2737: dethiobiotin synthase (NCBI ptt file)
is similar to:
PaperBLAST

BIODA_EMENI / Q5AYI6: Bifunctional dethiobiotin synthetase/adenosylmethionine-8-amino-7-oxononanoate aminotransferase; EC 6.3.3.3; EC 2.6.1.62 from Emericella nidulans

34% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory