Searching in Shewanella oneidensis MR-1 (MR1)
Found 28 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).
These curated entries have 21 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO2915: acetate kinase (NCBI ptt file) is similar to: | PaperBLAST |
E3W769: acetate kinase (EC 2.7.2.1) from Shewanella sp. | 83% id, 100% cov |
ACKA_SALTY / P63411: Acetate kinase AckA; Acetokinase; EC 2.7.2.1 from Salmonella typhimurium | 63% id, 100% cov |
ACKA_ECOLI / P0A6A3: Acetate kinase; Acetokinase; EC 2.7.2.1 from Escherichia coli | 63% id, 100% cov |
| SO3613: phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) is similar to: | PaperBLAST |
PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli | 69% id, 96% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3774191-3775378 (frame +2) on 139 is similar to: | PaperBLAST |
PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli | 68% id, 99% cov |
Lawrence Berkeley National Laboratory