Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 25 curated entries in PaperBLAST's database that match '2.7.7.64' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO1665: UTP-glucose-1-phosphate uridylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU / P0AEP3: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Escherichia coli

71% id,
98% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

44% id,
98% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

43% id,
99% cov

SO3186: glucose-1-phosphate-thymidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

29% id,
94% cov

GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU / P0AEP3: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Escherichia coli

25% id,
99% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

28% id,
83% cov

More...

SO3634: nucleotidyltransferase family protein (NCBI ptt file)
is similar to:
PaperBLAST

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

26% id,
92% cov

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

34% id,
45% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

48% id,
17% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory