Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 30 curated entries in PaperBLAST's database that match '3.1.3.15'.

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO2071: imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase (NCBI ptt file) is similar to:	PaperBLAST
HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli	61% id, 100% cov
HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli	61% id, 100% cov
HIS7_BACTN / Q8ABA7: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Bacteroides thetaiotaomicron	46% id, 100% cov
HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale	53% id, 53% cov
More...

SO2260: extragenic suppressor protein SuhB (NCBI ptt file) is similar to:	PaperBLAST
AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense	31% id, 97% cov
Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis	31% id, 95% cov
HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor	30% id, 95% cov
PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens	32% id, 88% cov
HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis	31% id, 89% cov
HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum	28% id, 88% cov
G7J7Q5: histidinol-phosphatase (EC 3.1.3.15); inositol-phosphate phosphatase (EC 3.1.3.25) from Medicago truncatula	29% id, 75% cov
HIS7_ARATH / Q6NPM8: Bifunctional phosphatase IMPL2, chloroplastic; Histidinol-phosphatase; Histidinol-phosphate phosphatase; HPP; Inositol-phosphate phosphatase; L-galactose 1-phosphate phosphatase; Protein HISTIDINE BIOSYNTHESIS 7; Protein MYO-INOSITOL MONOPHOSPHATASE-LIKE 2; EC 3.1.3.15; EC 3.1.3.25; EC 3.1.3.93 from Arabidopsis thaliana HISN7 / Q6NPM8: histidinol phosphate phosphatase (EC 3.1.3.15; EC 3.1.3.93; EC 3.1.3.25) from Arabidopsis thaliana Q6NPM8: histidinol-phosphatase (EC 3.1.3.15); inositol-phosphate phosphatase (EC 3.1.3.25) from Arabidopsis thaliana	33% id, 62% cov
Q8NS79: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum	34% id, 26% cov
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SO0191: cysQ protein (NCBI ptt file) is similar to:	PaperBLAST
Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis	29% id, 92% cov
HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis	29% id, 86% cov
HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum	28% id, 85% cov
G7J7Q5: histidinol-phosphatase (EC 3.1.3.15); inositol-phosphate phosphatase (EC 3.1.3.25) from Medicago truncatula	25% id, 73% cov
HIS7_ARATH / Q6NPM8: Bifunctional phosphatase IMPL2, chloroplastic; Histidinol-phosphatase; Histidinol-phosphate phosphatase; HPP; Inositol-phosphate phosphatase; L-galactose 1-phosphate phosphatase; Protein HISTIDINE BIOSYNTHESIS 7; Protein MYO-INOSITOL MONOPHOSPHATASE-LIKE 2; EC 3.1.3.15; EC 3.1.3.25; EC 3.1.3.93 from Arabidopsis thaliana HISN7 / Q6NPM8: histidinol phosphate phosphatase (EC 3.1.3.15; EC 3.1.3.93; EC 3.1.3.25) from Arabidopsis thaliana Q6NPM8: histidinol-phosphatase (EC 3.1.3.15); inositol-phosphate phosphatase (EC 3.1.3.25) from Arabidopsis thaliana	24% id, 74% cov
AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense	33% id, 49% cov
PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens	31% id, 44% cov
More...

SO1655: cysQ protein (NCBI ptt file) is similar to:	PaperBLAST
AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense	29% id, 87% cov
HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis	29% id, 87% cov
HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum	27% id, 84% cov
G7J7Q5: histidinol-phosphatase (EC 3.1.3.15); inositol-phosphate phosphatase (EC 3.1.3.25) from Medicago truncatula	28% id, 73% cov
PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens	32% id, 47% cov
Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis	32% id, 45% cov
HIS7_ARATH / Q6NPM8: Bifunctional phosphatase IMPL2, chloroplastic; Histidinol-phosphatase; Histidinol-phosphate phosphatase; HPP; Inositol-phosphate phosphatase; L-galactose 1-phosphate phosphatase; Protein HISTIDINE BIOSYNTHESIS 7; Protein MYO-INOSITOL MONOPHOSPHATASE-LIKE 2; EC 3.1.3.15; EC 3.1.3.25; EC 3.1.3.93 from Arabidopsis thaliana HISN7 / Q6NPM8: histidinol phosphate phosphatase (EC 3.1.3.15; EC 3.1.3.93; EC 3.1.3.25) from Arabidopsis thaliana Q6NPM8: histidinol-phosphatase (EC 3.1.3.15); inositol-phosphate phosphatase (EC 3.1.3.25) from Arabidopsis thaliana	33% id, 34% cov
More...

SO0830: alkaline phosphatase (NCBI ptt file)
is similar to:

PaperBLAST

PsiA / b0383: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli
phoA / P00634: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli

32% id,
77% cov

SO2851: histidinol phosphatase domain protein (NCBI ptt file) is similar to:	PaperBLAST
HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli	30% id, 40% cov
HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli	30% id, 40% cov

SO0737.1: hypothetical alkaline phosphatase (NCBI ptt file)
is similar to:

PaperBLAST

35% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

754441-755373 (frame +1) on 139
is similar to:

PaperBLAST

35% id,
31% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory