Searching in Shewanella oneidensis MR-1 (MR1)
Found 8 curated entries in PaperBLAST's database that match '3.5.1.30' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO4092: hydrolase, carbon-nitrogen family (NCBI ptt file) is similar to: | PaperBLAST |
B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 31% id, 100% cov |
davA / Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 34% id, 85% cov |
Pf6N2E2_4777: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 29% id, 96% cov |
| SO1177: apolipoprotein N-acyltransferase (NCBI ptt file) is similar to: | PaperBLAST |
PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 23% id, 56% cov |
Pf6N2E2_4777: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 21% id, 51% cov |
AO356_14225: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 21% id, 51% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory