Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 5 curated entries in PaperBLAST's database that match '3.5.1.53'.

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO4092: hydrolase, carbon-nitrogen family (NCBI ptt file)
is similar to:
PaperBLAST

C8J_0890 / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

29% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory