Searching in Shewanella oneidensis MR-1 (MR1)
Found 7 curated entries in PaperBLAST's database that match '3.5.3.8'.
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO4198: arginase family protein (NCBI ptt file) is similar to: | PaperBLAST |
Sama_3201: Formiminoglutamase (EC 3.5.3.8) from Shewanella amazonensis | 66% id, 77% cov |
CA265_RS21455: Formiminoglutamase (EC 3.5.3.8) from Pedobacter sp. | 38% id, 66% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4365490-4366542 (frame +1) on 139 is similar to: | PaperBLAST |
Sama_3201: Formiminoglutamase (EC 3.5.3.8) from Shewanella amazonensis | 62% id, 100% cov |
CA265_RS21455: Formiminoglutamase (EC 3.5.3.8) from Pedobacter sp. | 38% id, 90% cov |
Lawrence Berkeley National Laboratory