Searching in Shewanella oneidensis MR-1 (MR1)
Found 65 curated entries in PaperBLAST's database that match '3.7.1.2'.
These curated entries have 46 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO1670: fumarylacetoacetate hydrolase family protein (NCBI ptt file) is similar to: | PaperBLAST |
SO1670: fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis | 100% id, 100% cov |
Psest_3512: fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) from Pseudomonas stutzeri | 70% id, 99% cov |
| SO1585: fumarylacetoacetate hydrolase family protein (NCBI ptt file) is similar to: | PaperBLAST |
A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii | 35% id, 91% cov |
A0A080VH08: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Pseudomonas aeruginosa | 34% id, 87% cov |
naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp. | 34% id, 83% cov |
| SO4347: acetolactate synthase II, large subunit (NCBI ptt file) is similar to: | PaperBLAST |
HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae | 26% id, 96% cov |
SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti | 26% id, 92% cov |
Q9L3I0: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Rhizobium leguminosarum | 27% id, 85% cov |
| SO2279: acetolactate synthase III, large subunit (NCBI ptt file) is similar to: | PaperBLAST |
IOLD_BACSU / P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; THcHDO hydrolase; EC 3.7.1.22 from Bacillus subtilis | 26% id, 88% cov |
Q9L3I0: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Rhizobium leguminosarum | 27% id, 86% cov |
SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti | 26% id, 87% cov |
| SO3262: acetolactate synthase isozyme I, large subunit (NCBI ptt file) is similar to: | PaperBLAST |
HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae | 25% id, 89% cov |
AO353_21360: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas fluorescens | 25% id, 58% cov |
PS417_11870: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas simiae | 25% id, 58% cov |
| SO2473: hydrolase, alpha/beta fold family (NCBI ptt file) is similar to: | PaperBLAST |
TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida | 22% id, 93% cov |
| SO1743: hydrolase, alpha/beta hydrolase fold family (NCBI ptt file) is similar to: | PaperBLAST |
TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida | 26% id, 71% cov |
| SO1681: enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) is similar to: | PaperBLAST |
BAMA_THAAR / O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; Beta-oxoacyl-CoA hydrolase; Oah; EC 3.7.1.21 from Thauera aromatica | 24% id, 64% cov |
BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens | 24% id, 53% cov |
| SO1680: enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) is similar to: | PaperBLAST |
BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens | 28% id, 53% cov |
| SO0021: fatty oxidation complex, alpha subunit (NCBI ptt file) is similar to: | PaperBLAST |
BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens | 24% id, 50% cov |
BAMA_THAAR / O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; Beta-oxoacyl-CoA hydrolase; Oah; EC 3.7.1.21 from Thauera aromatica | 23% id, 46% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4539496-4541307 (frame -1) on 139 is similar to: | PaperBLAST |
HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae | 26% id, 98% cov |
Lawrence Berkeley National Laboratory