Searching in Shewanella oneidensis MR-1 (MR1)
Found 15 curated entries in PaperBLAST's database that match '4.1.1.43' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO2340: alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) is similar to: | PaperBLAST |
ppdcβ / G1UHX5: phenylpyruvate decarboxylase β subunit (EC 4.1.1.43) from Streptomyces virginiae | 46% id, 98% cov |
| SO2339: alpha keto acid dehydrogenase complex, E1 component, alpha subunit (NCBI ptt file) is similar to: | PaperBLAST |
ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae | 37% id, 87% cov |
| SO4347: acetolactate synthase II, large subunit (NCBI ptt file) is similar to: | PaperBLAST |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 26% id, 95% cov |
ARO10_YEAST / Q06408: Transaminated amino acid decarboxylase; Thiamine diphosphate-dependent phenylpyruvate decarboxylase; PPDC; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; Transaminated branched-chain amino acid decarboxylase; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74; EC 4.1.1.80 from Saccharomyces cerevisiae | 26% id, 24% cov |
| SO3262: acetolactate synthase isozyme I, large subunit (NCBI ptt file) is similar to: | PaperBLAST |
pdc / Q5NYJ8: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aromatoleum aromaticum | 26% id, 63% cov |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 28% id, 21% cov |
| SO2279: acetolactate synthase III, large subunit (NCBI ptt file) is similar to: | PaperBLAST |
pdc / Q5NYJ8: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aromatoleum aromaticum | 26% id, 60% cov |
Q2UKV4: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aspergillus oryzae | 24% id, 65% cov |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 26% id, 60% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory