Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 105 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 81 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO0933: fructose-bisphosphate aldolase, class II, Calvin cycle subtype (NCBI ptt file)
is similar to:
PaperBLAST

Q602L6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Methylococcus capsulatus

71% id,
100% cov

ALF_XANFL / Q56815: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Xanthobacter flavus

67% id,
99% cov

ALF_NOSS1 / Q8YNK2: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Nostoc sp.

66% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory