SO2248: L-serine dehydratase 1 (NCBI ptt file) is similar to: | PaperBLAST |
RR42_RS20080: L-serine ammonia-lyase (EC 4.3.1.17) from Cupriavidus basilensis | 59% id, 100% cov |
Pf6N2E2_5557: L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens | 59% id, 100% cov |
BPHYT_RS19340: L-serine ammonia-lyase (EC 4.3.1.17) from Burkholderia phytofirmans | 57% id, 100% cov |
Pf1N1B4_1013: L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens | 57% id, 100% cov |
PfGW456L13_4954: L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens | 56% id, 100% cov |
SdaA / b1814: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli sdaA / P16095: L-serine deaminase I (EC 4.3.1.17) from Escherichia coli P16095: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli | 56% id, 100% cov |
Ac3H11_929: L-serine ammonia-lyase (EC 4.3.1.17) from Acidovorax sp. | 56% id, 100% cov |
AO353_15500: L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens | 56% id, 100% cov |
SDHM_ECOLI / P30744: L-serine dehydratase 2; SDH 2; L-serine deaminase 2; L-SD2; EC 4.3.1.17 from Escherichia coli SdaB / b2797: L-serine deaminase II (EC 4.3.1.17) from Escherichia coli sdaB / GB|AAC75839.1: L-serine dehydratase 2; EC 4.3.1.17 from Escherichia coli sdaB / P30744: L-serine deaminase II (EC 4.3.1.17) from Escherichia coli P30744: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli | 55% id, 100% cov |
YhaQ / b4471: L-serine deaminase III (EC 4.3.1.17) from Escherichia coli tdcG / P42630: L-serine deaminase III (EC 4.3.1.17) from Escherichia coli P42630: L-serine ammonia-lyase (EC 4.3.1.17) from Escherichia coli | 55% id, 100% cov |
Q5ZXE1: L-serine ammonia-lyase (EC 4.3.1.17) from Legionella pneumophila | 52% id, 100% cov |
sdaA / RF|YP_225930.1: L-serine ammonia-lyase; EC 4.3.1.17 from Corynebacterium glutamicum sdaA / Q8NQ09: L-serine dehydratase (EC 4.3.1.17) from Corynebacterium glutamicum | 48% id, 100% cov |
DvMF_0011: L-serine ammonia-lyase (EC 4.3.1.17) from Desulfovibrio vulgaris | 42% id, 98% cov |
sdhA / P33073: L-serine dehydratase α subunit (EC 4.3.1.17) from Peptoniphilus asaccharolyticus | 35% id, 94% cov |
sdhB / P33074: L-serine dehydratase β subunit (EC 4.3.1.17) from Peptoniphilus asaccharolyticus | 28% id, 83% cov |
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SO4344: threonine dehydratase (NCBI ptt file) is similar to: | PaperBLAST |
ILVA_ECOLI / P04968: L-threonine dehydratase biosynthetic IlvA; Threonine deaminase; EC 4.3.1.19 from Escherichia coli Ile / b3772: threonine deaminase (EC 4.3.1.19) from Escherichia coli ilvA / P04968: threonine deaminase (EC 4.3.1.19) from Escherichia coli P04968: threonine ammonia-lyase (EC 4.3.1.19) from Escherichia coli | 58% id, 100% cov |
V6QU65: threonine ammonia-lyase (EC 4.3.1.19) from Fusarium graminearum | 49% id, 93% cov |
THDH_YEAST / P00927: Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19 from Saccharomyces cerevisiae | 50% id, 89% cov |
TD1_SOLLC / A0FKE6: Threonine dehydratase 1 biosynthetic, chloroplastic; SlTD1; Threonine deaminase 1; EC 4.3.1.19 from Solanum lycopersicum | 47% id, 91% cov |
TD_NICAT / Q9AXU4: Threonine dehydratase; Threonine deaminase; EC 4.3.1.19 from Nicotiana attenuata Q9AXU4: threonine ammonia-lyase (EC 4.3.1.19) from Nicotiana attenuata | 45% id, 90% cov |
THDH_SCHPO / O94634: Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19 from Schizosaccharomyces pombe | 46% id, 84% cov |
TD_SOLTU / P31212: Threonine dehydratase biosynthetic, chloroplastic; Threonine deaminase; EC 4.3.1.19 from Solanum tuberosum | 39% id, 99% cov |
CA265_RS15860: threonine deaminase (EC 4.3.1.19) from Pedobacter sp. | 39% id, 94% cov |
TD2_SOLLC / P25306: Threonine dehydratase 2 biosynthetic, chloroplastic; SlTD2; Threonine deaminase 2; EC 4.3.1.17; EC 4.3.1.19 from Solanum lycopersicum | 42% id, 86% cov |
A0QY48: L-serine ammonia-lyase (EC 4.3.1.17) from Mycolicibacterium smegmatis | 39% id, 91% cov |
TSAL_THEMA / Q9WYJ1: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine dehydratase; EC 4.3.1.19; EC 4.3.1.17 from Thermotoga maritima | 37% id, 96% cov |
TDCB_SALTY / P11954: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Salmonella typhimurium | 38% id, 93% cov |
Q04513: threonine ammonia-lyase (EC 4.3.1.19) from Corynebacterium glutamicum | 35% id, 97% cov |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens Q74FW6: threonine ammonia-lyase (EC 4.3.1.19) from Geobacter sulfurreducens | 36% id, 95% cov |
TDCB_ECOLI / P0AGF6: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Escherichia coli Tdc / b3117: catabolic threonine dehydratase (EC 4.3.1.17; EC 4.3.1.19) from Escherichia coli tdcB / RF|NP_417587: threonine ammonia-lyase; EC 4.3.1.19 from Escherichia coli tdcB / P0AGF6: catabolic threonine dehydratase (EC 4.3.1.17; EC 4.3.1.19) from Escherichia coli | 38% id, 90% cov |
A0QX60: threonine ammonia-lyase (EC 4.3.1.19) from Mycolicibacterium smegmatis | 36% id, 93% cov |
CCNA_03750: threonine deaminase (EC 4.3.1.19) from Caulobacter crescentus | 36% id, 94% cov |
LTHAD_PSESP / A4F2N8: L-threo-3-hydroxyaspartate ammonia-lyase; L-threo-3-hydroxyaspartate dehydratase; L-THA DH; EC 4.3.1.16 from Pseudomonas sp. thadh / A4F2N8: L-threo-3-hydroxy aspartate ammonia-lyase (EC 4.3.1.16) from Pseudomonas sp. A4F2N8: threo-3-hydroxy-L-aspartate ammonia-lyase (EC 4.3.1.16) from Pseudomonas sp. | 34% id, 98% cov |
LTHAD_YEAST / P36007: L-threo-3-hydroxyaspartate ammonia-lyase; L-threo-3-hydroxyaspartate dehydratase; EC 4.3.1.16 from Saccharomyces cerevisiae | 35% id, 93% cov |
SRR_ORYSJ / Q7XSN8: Serine racemase; D-serine dehydratase; D-serine ammonia-lyase; L-serine dehydratase; L-serine ammonia-lyase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Oryza sativa | 33% id, 98% cov |
SRR_ARATH / Q2PGG3: Serine racemase; AtSR; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Arabidopsis thaliana | 36% id, 89% cov |
SRR_RAT / Q76EQ0: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Rattus norvegicus | 33% id, 96% cov |
SDSL_MOUSE / Q8R238: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; SDH; EC 4.3.1.17; EC 4.3.1.19 from Mus musculus | 33% id, 95% cov |
SRR_MOUSE / Q9QZX7: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Mus musculus | 33% id, 94% cov |
L0N5C4: threo-3-hydroxy-L-aspartate ammonia-lyase (EC 4.3.1.16) from Pseudomonas sp. | 34% id, 91% cov |
SRR_HUMAN / Q9GZT4: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Homo sapiens | 31% id, 96% cov |
SRR_SCHPO / O59791: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Schizosaccharomyces pombe | 33% id, 91% cov |
Ga0059261_3694: threonine deaminase (EC 4.3.1.19) from Sphingomonas koreensis | 31% id, 95% cov |
Q54HH2: D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum | 33% id, 92% cov |
B1N2N4: L-serine ammonia-lyase (EC 4.3.1.17) from Entamoeba histolytica | 37% id, 80% cov |
A0A0X1KHE6: L-serine ammonia-lyase (EC 4.3.1.17) from Rhizomucor miehei | 28% id, 84% cov |
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SO3598: cysteine synthase B (NCBI ptt file) is similar to: | PaperBLAST |
SRR_ORYSJ / Q7XSN8: Serine racemase; D-serine dehydratase; D-serine ammonia-lyase; L-serine dehydratase; L-serine ammonia-lyase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Oryza sativa | 24% id, 82% cov |
SRR_HUMAN / Q9GZT4: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Homo sapiens | 23% id, 86% cov |
SRR_RAT / Q76EQ0: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Rattus norvegicus | 25% id, 60% cov |
SRR_MOUSE / Q9QZX7: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Mus musculus | 24% id, 59% cov |
L0N5C4: threo-3-hydroxy-L-aspartate ammonia-lyase (EC 4.3.1.16) from Pseudomonas sp. | 24% id, 61% cov |
ILVA_ECOLI / P04968: L-threonine dehydratase biosynthetic IlvA; Threonine deaminase; EC 4.3.1.19 from Escherichia coli Ile / b3772: threonine deaminase (EC 4.3.1.19) from Escherichia coli ilvA / P04968: threonine deaminase (EC 4.3.1.19) from Escherichia coli P04968: threonine ammonia-lyase (EC 4.3.1.19) from Escherichia coli | 27% id, 37% cov |
TD1_SOLLC / A0FKE6: Threonine dehydratase 1 biosynthetic, chloroplastic; SlTD1; Threonine deaminase 1; EC 4.3.1.19 from Solanum lycopersicum | 30% id, 32% cov |
DPAL_ECOLI / P66899: Diaminopropionate ammonia-lyase; DAPAL; 2,3-diaminopropionate ammonia-lyase; Alpha,beta-diaminopropionate ammonia-lyase; Diaminopropionatase; EC 4.3.1.15 from Escherichia coli YgeX / b2871: 2,3-diaminopropionate ammonia-lyase (EC 4.3.1.15) from Escherichia coli ygeX / P66899: 2,3-diaminopropionate ammonia-lyase (EC 4.3.1.15) from Escherichia coli P66899: Diaminopropionate ammonia-lyase (EC 4.3.1.15) from Escherichia coli | 33% id, 17% cov |
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Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.