Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella oneidensis MR-1 (MR1)

Found 9 curated entries in PaperBLAST's database that match '5.4.2.6' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella oneidensis MR-1, or try another query

SO0431: HAD-superfamily hydrolase, subfamily IA, variant 3 protein family (NCBI ptt file)
is similar to:
PaperBLAST

PGMB_ECOLI / P77366: Beta-phosphoglucomutase; Beta-PGM; EC 5.4.2.6 from Escherichia coli
ycjU / P77366: β-phosphoglucomutase (EC 5.4.2.6) from Escherichia coli
P77366: beta-Phosphoglucomutase (EC 5.4.2.6) from Escherichia coli

28% id,
88% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory