Searching in Shewanella oneidensis MR-1 (MR1)
Found 6 curated entries in PaperBLAST's database that match '6.1.1.24' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO1786: glutaminyl-tRNA synthetase (NCBI ptt file) is similar to: | PaperBLAST |
P00962: glutamine-tRNA ligase (EC 6.1.1.18); glutamate-tRNAGln ligase (EC 6.1.1.24) from Escherichia coli | 72% id, 99% cov |
SYEM_HUMAN / Q5JPH6: Nondiscriminating glutamyl-tRNA synthetase EARS2, mitochondrial; Glutamate--tRNA(Gln) ligase EARS2, mitochondrial; Glutamyl-tRNA synthetase; GluRS; Mitochondrial glutamyl-tRNA synthetase; mtGluRS; EC 6.1.1.24; EC 6.1.1.17 from Homo sapiens | 25% id, 40% cov |
CCNA_01982: glutamyl-tRNA(Glx) synthetase (EC 6.1.1.24) from Caulobacter crescentus | 35% id, 27% cov |
| SO0873: glutamyl-tRNA synthetase domain protein (NCBI ptt file) is similar to: | PaperBLAST |
gltX / P22250: glutamyl-tRNAGlx synthetase (EC 6.1.1.17; EC 6.1.1.24) from Bacillus subtilis | 31% id, 63% cov |
SYEM_HUMAN / Q5JPH6: Nondiscriminating glutamyl-tRNA synthetase EARS2, mitochondrial; Glutamate--tRNA(Gln) ligase EARS2, mitochondrial; Glutamyl-tRNA synthetase; GluRS; Mitochondrial glutamyl-tRNA synthetase; mtGluRS; EC 6.1.1.24; EC 6.1.1.17 from Homo sapiens | 33% id, 57% cov |
CCNA_01982: glutamyl-tRNA(Glx) synthetase (EC 6.1.1.24) from Caulobacter crescentus | 34% id, 53% cov |
| SO3128.2: hypothetical glutamate tRNA synthetase (NCBI ptt file) is similar to: | PaperBLAST |
CCNA_01982: glutamyl-tRNA(Glx) synthetase (EC 6.1.1.24) from Caulobacter crescentus | 48% id, 38% cov |
gltX / P22250: glutamyl-tRNAGlx synthetase (EC 6.1.1.17; EC 6.1.1.24) from Bacillus subtilis | 41% id, 40% cov |
Q9X2I8: glutamate-tRNAGln ligase (EC 6.1.1.24) from Thermotoga maritima | 40% id, 36% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3259787-3260641 (frame -3) on 139 is similar to: | PaperBLAST |
CCNA_01982: glutamyl-tRNA(Glx) synthetase (EC 6.1.1.24) from Caulobacter crescentus | 37% id, 59% cov |
gltX / P22250: glutamyl-tRNAGlx synthetase (EC 6.1.1.17; EC 6.1.1.24) from Bacillus subtilis | 35% id, 58% cov |
Q9X2I8: glutamate-tRNAGln ligase (EC 6.1.1.24) from Thermotoga maritima | 34% id, 58% cov |
Lawrence Berkeley National Laboratory