Searching in Shewanella oneidensis MR-1 (MR1)
Found 11 curated entries in PaperBLAST's database that match '6.2.1.16'.
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Shewanella oneidensis MR-1, or try another query
SO1971: AMP-binding family protein (NCBI ptt file) is similar to: | PaperBLAST |
Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp. | 55% id, 99% cov |
SO2581: long-chain-fatty-acid--CoA ligase (NCBI ptt file) is similar to: | PaperBLAST |
Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp. | 30% id, 94% cov |
SO3664: long-chain-fatty-acid--CoA ligase (NCBI ptt file) is similar to: | PaperBLAST |
Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp. | 31% id, 92% cov |
SO2743: acetyl-coenzyme A synthetase (NCBI ptt file) is similar to: | PaperBLAST |
AACS_RHIME / Q9Z3R3: Acetoacetyl-coenzyme A synthetase; Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rhizobium meliloti | 26% id, 93% cov |
AACS_MOUSE / Q9D2R0: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Mus musculus | 25% id, 91% cov |
aacS / D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans | 25% id, 92% cov |
SO0355: AMP-binding protein (NCBI ptt file) is similar to: | PaperBLAST |
aacS / D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans | 22% id, 84% cov |
SO4576: O-succinylbenzoic acid--CoA ligase, putative (NCBI ptt file) is similar to: | PaperBLAST |
Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp. | 30% id, 56% cov |
SO0075: AMP-binding family protein (NCBI ptt file) is similar to: | PaperBLAST |
Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp. | 25% id, 35% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory