Searching in Shewanella oneidensis MR-1 (MR1)
Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO2279: acetolactate synthase III, large subunit (NCBI ptt file) is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 48% id, 97% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 45% id, 94% cov |
| SO4347: acetolactate synthase II, large subunit (NCBI ptt file) is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 45% id, 97% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 44% id, 93% cov |
| SO3262: acetolactate synthase isozyme I, large subunit (NCBI ptt file) is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 36% id, 95% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 30% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4539496-4541307 (frame -1) on 139 is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 44% id, 99% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 43% id, 96% cov |
Lawrence Berkeley National Laboratory