Searching in Shewanella oneidensis MR-1 (MR1)
Found 5 curated entries in PaperBLAST's database that match 'arginosuccinate lyase' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Shewanella oneidensis MR-1, or try another query
| SO0279: argininosuccinate lyase (NCBI ptt file) is similar to: | PaperBLAST |
AN2914: arginosuccinate lyase (Eurofung) from Emericella nidulans | 42% id, 92% cov |
N515DRAFT_3770: arginosuccinate lyase (EC 4.3.2.1) from Dyella japonica | 32% id, 94% cov |
BT3733: arginosuccinate lyase (EC 4.3.2.1) from Bacteroides thetaiotaomicron | 35% id, 83% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 284593-285972 (frame +1) on 139 is similar to: | PaperBLAST |
AN2914: arginosuccinate lyase (Eurofung) from Emericella nidulans | 42% id, 93% cov |
N515DRAFT_3770: arginosuccinate lyase (EC 4.3.2.1) from Dyella japonica | 31% id, 99% cov |
Lawrence Berkeley National Laboratory