Searching in Shewanella oneidensis MR-1 (MR1)
Found 1 curated entries in PaperBLAST's database that match 'cystathionine-gamma-lyase' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Shewanella oneidensis MR-1, or try another query
SO4056: cystathionine gamma-synthase (NCBI ptt file) is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 45% id, 90% cov |
SO1812: methionine gamma-lyase (NCBI ptt file) is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 38% id, 91% cov |
SO2191: cystathionine beta-lyase (NCBI ptt file) is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 31% id, 91% cov |
SO1095: O-acetylhomoserine (thiol)-lyase, putative (NCBI ptt file) is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 31% id, 50% cov |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 34% id, 42% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1902167-1903387 (frame +2) on 139 is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 38% id, 92% cov |
Lawrence Berkeley National Laboratory